Superzchen / iFeatureOmega-CLILinks
iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequences, 3D structures and ligands. To the best of our knowledge, iFeatureOmega supplies the largest number of feature extraction and analysis approaches for most molecule types compared to other pipelines. Three ver…
☆32Updated 2 years ago
Alternatives and similar repositories for iFeatureOmega-CLI
Users that are interested in iFeatureOmega-CLI are comparing it to the libraries listed below
Sorting:
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- ColabFold protocol☆56Updated last year
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆19Updated 4 years ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆46Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated 3 years ago
- Geometric deep learning of protein–DNA binding specificity☆76Updated 10 months ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆35Updated 2 months ago
- Geometry-aware protein binding site predictor☆25Updated last year
- Long disorder consensus predictor☆18Updated 4 months ago
- Protein language model trained on coding DNA☆53Updated last year
- Generator and regressor neural networks for antimicrobial peptides☆25Updated last year
- ☆25Updated 2 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆115Updated 5 months ago
- A software package for computing features of peptides and proteins☆65Updated last year
- Python generic modular semi-automated platform containing functions for the classification of proteins based on their physicochemical pro…☆35Updated 2 years ago
- Feature map and function annotation of Proteins☆34Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆63Updated 9 months ago
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆29Updated last year
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆24Updated last year
- Tools for annotation, processing and ML for antibody sequences☆37Updated last week
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- ☆55Updated 5 months ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆34Updated 4 months ago
- Predict the structure of immune receptor proteins☆59Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆65Updated 3 weeks ago
- ☆48Updated last month
- ☆36Updated last year
- Neural networks for deep mutational scanning data☆72Updated 7 months ago