Alternatives and similar repositories for MLBP

Users that are interested in MLBP are comparing it to the libraries listed below

• BackofenLab / RNAProt
  Modelling RBP binding preferences to predict RPB binding sites
  ☆11Updated 2 years ago
• Tsedao / MultiRM
  [Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely …
  ☆31Updated 3 years ago
• holab-hku / MTtrans
  ☆9Updated last year
• yangyn533 / 3UTRBERT
  ☆16Updated last year
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆83Updated 3 years ago
• kkyamada / bert-rbp
  ☆29Updated 2 years ago
• Karollus / 5UTR
  Code for the Framepool model
  ☆13Updated 6 months ago
• ntranoslab / esm-variants
  ☆77Updated last year
• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆60Updated 4 months ago
• mayuefine / c_AMPs-prediction
  ☆83Updated 2 years ago
• dohlee / chromoformer
  The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)
  ☆36Updated last year
• XWangLabTHU / NeuronMotif
  NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks
  ☆15Updated 2 years ago
• ychuest / Awesome-LLMs-meet-genomes
  Explore a comprehensive collection of basic theories, applications, papers, and best practices about Large Language Models (LLMs) in geno…
  ☆79Updated last week
• MedChaabane / DeepBind-with-PyTorch
  CNN architecture for predicting DNA binding sites for Transcription Factors
  ☆53Updated 6 years ago
• KennthShang / MTDP
  Multi-Teacher Distillation for Protein embedding
  ☆11Updated last year
• lingxusb / Riboformer
  ☆21Updated 2 months ago
• OATML-Markslab / EVE
  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…
  ☆177Updated last year
• a96123155 / UTR-LM
  ☆90Updated 10 months ago
• CatIIIIIIII / RNAErnie
  Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"
  ☆48Updated 10 months ago
• TencentAILabHealthcare / DNAGPT
  ☆43Updated last year
• kuixu / PrismNet
  Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure
  ☆65Updated last year
• YangLab / RNAlight
  a machine learning model to identify nucleotide features determining RNA subcellular localization
  ☆14Updated 2 years ago
• d-laub / basenji2-pytorch
  PyTorch implementation of Basenji2.
  ☆16Updated 3 months ago
• MAGICS-LAB / DNABERT_S
  [ISMB 2025] DNABERT_S: Learning Species-Aware DNA Embedding with Genome Foundation Models
  ☆107Updated 6 months ago
• chenkenbio / SpliceBERT
  Primary RNA sequence model
  ☆38Updated last year
• wukevin / tcr-bert
  Large language modeling applied to T-cell receptor (TCR) sequences.
  ☆55Updated 3 years ago
• TencentAILabHealthcare / DeepAIR
  ☆36Updated 2 years ago
• liu-bioinfo-lab / EPCOT
  ☆23Updated last year
• viragbioinfo / IMMREP_2022_TCRSpecificity
  ☆20Updated 2 years ago
• de-Boer-Lab / random-promoter-dream-challenge-2022
  ☆31Updated 6 months ago