Karollus / 5UTRLinks
Code for the Framepool model
☆14Updated 9 months ago
Alternatives and similar repositories for 5UTR
Users that are interested in 5UTR are comparing it to the libraries listed below
Sorting:
- ☆82Updated 2 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆35Updated 3 years ago
- ☆23Updated 5 months ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆56Updated last year
- ☆33Updated 9 months ago
- ☆42Updated 3 months ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆34Updated 3 years ago
- HLA-II ligand predictor.☆45Updated 2 years ago
- ☆91Updated last year
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆87Updated 3 years ago
- Computational Optimization of DNA Activity (CODA)☆64Updated 7 months ago
- Multi-class signal peptide prediction and structure decoding model.☆97Updated 9 months ago
- Code for 5UTR project☆25Updated 2 years ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆57Updated 3 years ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆53Updated 6 years ago
- A method to predict DNA shape features considering farther flanking region.☆36Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆73Updated 2 years ago
- python tools for TCR:peptide-MHC modeling and analysis☆82Updated last year
- HLA-I ligand predictor☆43Updated last month
- NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks☆15Updated 2 years ago
- iCodon customizes gene expression based on the codon composition☆15Updated 2 years ago
- ☆20Updated 3 years ago
- Promoter activity measurement and modeling; artificial promoter design and testing☆13Updated 2 years ago
- ☆18Updated last year
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆43Updated 4 months ago
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆23Updated last year
- Feature map and function annotation of Proteins☆34Updated last year
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆16Updated 4 years ago
- Explore a comprehensive collection of basic theories, applications, papers, and best practices about Large Language Models (LLMs) in geno…☆106Updated 3 months ago
- ☆15Updated 11 months ago