Code for the Framepool model
☆15Feb 1, 2025Updated last year
Alternatives and similar repositories for 5UTR
Users that are interested in 5UTR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Nov 6, 2023Updated 2 years ago
- ☆12Feb 6, 2023Updated 3 years ago
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆24Jul 2, 2024Updated 2 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Dec 9, 2021Updated 4 years ago
- Deep Exploration Networks - Diverse Deep Generative Models for DNA, RNA and Protein Sequences☆31Oct 1, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- REMoving Bias from Rna-seq ANalysis of Differential Transcript Stability☆15Dec 16, 2023Updated 2 years ago
- Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression☆24May 11, 2025Updated last year
- Pipeline for processing of GoT-ChA genotyping data and downstream analysis☆15Mar 17, 2025Updated last year
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆53Aug 13, 2024Updated last year
- Saluki, a method to predict mRNA half-lives from sequence☆27Oct 7, 2022Updated 3 years ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆61Jul 3, 2019Updated 7 years ago
- This repository hosts a minimal version of a Python API for BPNet.☆59Updated this week
- Repository for mRNA Paper and CodonBERT publication.☆146May 19, 2026Updated 2 months ago
- Species-aware DNA language modeling☆18Jan 25, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Size-Wise Analysis of Transfer Learning of pLM Embeddings☆13Jun 10, 2025Updated last year
- ActiveDriverDB☆12May 1, 2023Updated 3 years ago
- Analysis of smFISH data☆12Aug 27, 2018Updated 7 years ago
- Transform data from RCSB Protein Data Bank for secondary structure prediction☆12Feb 20, 2019Updated 7 years ago
- Species-aware DNA language models capture regulatory elements and their evolution☆29Aug 21, 2023Updated 2 years ago
- https://www.biorxiv.org/content/10.1101/2023.07.03.547592v2☆32Jan 22, 2025Updated last year
- ☆26Jun 5, 2025Updated last year
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desig…☆63Oct 27, 2015Updated 10 years ago
- A tool for visualising kmers in 2D space.☆14Feb 23, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Echarts(v5.x | next) components for react.☆11Mar 4, 2021Updated 5 years ago
- Jax code for functional genomics ML☆14Mar 5, 2025Updated last year
- nextjs + socketio sample chat App☆12Sep 7, 2020Updated 5 years ago
- ☆94Oct 9, 2024Updated last year
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- "Global Importance Analysis: A Method to Quantify Importance of Genomic Features in Deep Neural Networks" by Koo et al.☆13Jun 22, 2022Updated 4 years ago
- openASO is a project designed to identify regulatory regions of an RNA that can be targeted by antisense oligonucleotides.☆14Sep 30, 2021Updated 4 years ago
- Repository for "NucleoBench: A Large-Scale Benchmark of Neural Nucleic Acid Design Algorithms"☆27Updated this week
- AIMS - Automated Immune Molecule Separator: An analysis pipeline for distinguishing distinct subsets of Ig and MHC molecules. See below s…☆11Jun 24, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A collection tutorial materials for the Fall 2018 CSC411/CSC2515 (Introduction to Machine Learning) at the University of Toronto.☆16Jun 10, 2026Updated last month
- code and dataset for spatialDWLS☆14Apr 18, 2021Updated 5 years ago
- This function implements quantile normalization in python matrix☆23Mar 7, 2022Updated 4 years ago
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆19Jul 5, 2019Updated 7 years ago
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 2 years ago
- Eterna100-V2 benchmarking results and scripts☆14May 19, 2026Updated 2 months ago
- ☆17May 22, 2025Updated last year