Code for the Framepool model
☆16Feb 1, 2025Updated last year
Alternatives and similar repositories for 5UTR
Users that are interested in 5UTR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Nov 6, 2023Updated 2 years ago
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆25Jul 2, 2024Updated 2 years ago
- ☆12Feb 6, 2023Updated 3 years ago
- Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression☆25May 11, 2025Updated last year
- Interpretation by Deep Generative Masking for Biological Sequences☆37Dec 9, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Deep Exploration Networks - Diverse Deep Generative Models for DNA, RNA and Protein Sequences☆31Oct 1, 2021Updated 5 years ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆61Jul 3, 2019Updated 7 years ago
- REMoving Bias from Rna-seq ANalysis of Differential Transcript Stability☆15Dec 16, 2023Updated 2 years ago
- Pipeline for processing of GoT-ChA genotyping data and downstream analysis☆16Mar 17, 2025Updated last year
- Repository for mRNA Paper and CodonBERT publication.☆148May 19, 2026Updated 5 months ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆53Aug 13, 2024Updated 2 years ago
- This is a stand-alone version of RSAT matrix-clustering. This version is faster and simplified compared to the original RSAT matrix-clust…☆12Aug 26, 2025Updated last year
- ☆20Dec 5, 2024Updated last year
- ☆99Oct 9, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Saluki, a method to predict mRNA half-lives from sequence☆32Oct 7, 2022Updated 4 years ago
- Species-aware DNA language modeling☆19Jan 25, 2023Updated 3 years ago
- Analysis of smFISH data☆12Aug 27, 2018Updated 8 years ago
- This repository hosts a minimal version of a Python API for BPNet.☆61Oct 19, 2026Updated last week
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆23Jul 28, 2025Updated last year
- ActiveDriverDB☆12May 1, 2023Updated 3 years ago
- Size-Wise Analysis of Transfer Learning of pLM Embeddings☆13Jun 10, 2025Updated last year
- Transform data from RCSB Protein Data Bank for secondary structure prediction☆12Feb 20, 2019Updated 7 years ago
- Simulation of somatically rearranged genomes☆11Jul 8, 2017Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆14Nov 6, 2025Updated 11 months ago
- Species-aware DNA language models capture regulatory elements and their evolution☆28Aug 21, 2023Updated 3 years ago
- https://www.biorxiv.org/content/10.1101/2023.07.03.547592v2☆32Jan 22, 2025Updated last year
- scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution.☆70Oct 23, 2026Updated last week
- mapping somatic variants to cell barcodes in scRNA-Seq data☆11Sep 21, 2026Updated last month
- Echarts(v5.x | next) components for react.☆11Mar 4, 2021Updated 5 years ago
- MTAE-based 5UTR design model☆12Jan 23, 2024Updated 2 years ago
- A tool for visualising kmers in 2D space.☆14Feb 23, 2025Updated last year
- ☆27Jun 5, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆10Jan 30, 2020Updated 6 years ago
- nextjs + socketio sample chat App☆12Sep 7, 2020Updated 6 years ago
- a variational autoencoder method for clustering single-cell mutation data☆11Apr 17, 2024Updated 2 years ago
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desig…☆62Oct 27, 2015Updated 11 years ago
- Jax code for functional genomics ML☆14Mar 5, 2025Updated last year
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆11Apr 30, 2024Updated 2 years ago
- Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests☆50Sep 2, 2026Updated last month