TencentAILabHealthcare / DNAGPT
☆32Updated last year
Related projects ⓘ
Alternatives and complementary repositories for DNAGPT
- Cell2Sentence turns scRNA-seq data into text for LLM training.☆84Updated 2 months ago
- ☆35Updated 11 months ago
- GeneCompass☆58Updated 3 months ago
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆48Updated 5 months ago
- ☆45Updated 9 months ago
- The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)☆34Updated last year
- Primary RNA sequence model☆29Updated 5 months ago
- Computational Optimization of DNA Activity (CODA)☆32Updated last month
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆76Updated 2 years ago
- ☆51Updated 2 months ago
- Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.☆48Updated 2 months ago
- Transformer for One-Stop Interpretable Cell-type Annotation☆131Updated 8 months ago
- ☆70Updated last month
- code to run EPInformer for gene expression prediction and gene-enhancer links prioritization☆30Updated this week
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆67Updated 7 months ago
- DNABERT_S: Learning Species-Aware DNA Embedding with Genome Foundation Models☆73Updated 5 months ago
- ☆66Updated last year
- Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".☆43Updated this week
- Benchmarks for classification of genomic sequences☆116Updated 8 months ago
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆107Updated 2 months ago
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆37Updated 3 years ago
- ☆26Updated 8 months ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆155Updated 7 months ago
- ☆153Updated this week
- Create cell sentences from sequencing data☆21Updated 2 months ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆48Updated 3 months ago
- Contextual AI models for single-cell protein biology☆72Updated last month
- Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of …☆27Updated 6 months ago
- A model developed for the generation of scRNA-seq data☆35Updated last month
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆48Updated 2 years ago