TencentAILabHealthcare / DNAGPTLinks
☆43Updated last year
Alternatives and similar repositories for DNAGPT
Users that are interested in DNAGPT are comparing it to the libraries listed below
Sorting:
- ☆22Updated 2 months ago
- Primary RNA sequence model☆38Updated last year
- ☆90Updated 10 months ago
- Benchmarking DNA Language Models on Biologically Meaningful Tasks☆123Updated 10 months ago
- Explore a comprehensive collection of basic theories, applications, papers, and best practices about Large Language Models (LLMs) in geno…☆79Updated 2 weeks ago
- The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)☆36Updated 2 years ago
- ☆47Updated 3 years ago
- ☆76Updated 2 weeks ago
- ☆72Updated last year
- Benchmarks for classification of genomic sequences☆153Updated 2 weeks ago
- Repository for mRNA Paper and CodonBERT publication.☆134Updated last year
- A collection of awesome bio-foundation models, including protein, RNA, DNA, gene, single-cell, and so on.☆249Updated 3 months ago
- Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.☆123Updated 6 months ago
- RiboNucleic Acid (RNA) Language Model☆122Updated 2 months ago
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆92Updated last year
- Contextual AI models for single-cell protein biology☆88Updated 6 months ago
- Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".☆62Updated 8 months ago
- GeneCompass☆86Updated 2 months ago
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆49Updated last year
- ☆77Updated last year
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆355Updated this week
- Computational Optimization of DNA Activity (CODA)☆60Updated 4 months ago
- AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…☆92Updated last week
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆178Updated last year
- Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.☆72Updated 2 months ago
- ☆19Updated 5 months ago
- Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.☆65Updated last week
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆84Updated 3 years ago
- Comprehensive suite for evaluating perturbation prediction models☆76Updated last week
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆27Updated last month