Tsedao / MultiRM
[Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely occurring RNA modifications'
☆28Updated 3 years ago
Alternatives and similar repositories for MultiRM:
Users that are interested in MultiRM are comparing it to the libraries listed below
- ☆20Updated 2 years ago
- A repository for neural representational learning of RNA secondary structures☆31Updated 5 years ago
- ☆33Updated last year
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆29Updated last year
- Graph-based representation learning method for protein function prediction☆24Updated 4 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆26Updated 11 months ago
- ☆16Updated 11 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆65Updated last year
- ☆41Updated 3 years ago
- ☆51Updated last year
- Predicting immunogenic peptide recognized by TCR through ensemble deep learning☆13Updated 10 months ago
- ☆33Updated last month
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆23Updated 11 months ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆13Updated 3 years ago
- Modelling RBP binding preferences to predict RPB binding sites☆11Updated last year
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆34Updated 5 months ago
- Protein language model trained on coding DNA☆46Updated 4 months ago
- Neural networks for deep mutational scanning data☆67Updated 3 months ago
- ☆73Updated 4 months ago
- Feature map and function annotation of Proteins☆31Updated 8 months ago
- ☆29Updated 2 years ago
- ☆19Updated last year
- DeepTTC: a transformer-based model for predicting cancer drug response☆15Updated last year
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆29Updated 2 months ago
- Primary RNA sequence model☆35Updated 9 months ago
- Latent Diffusion Model for DNA Sequence Generation☆23Updated 3 months ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆50Updated 9 months ago
- Deep learning-based multi-functional therapeutic peptides prediction with a multi-label focal dice loss function☆9Updated 8 months ago
- ☆18Updated 11 months ago