Alternatives and similar repositories for NeuronMotif

Users that are interested in NeuronMotif are comparing it to the libraries listed below

• jzhoulab / puffin_manuscript
  ☆17Updated 7 months ago
• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆59Updated 2 months ago
• de-Boer-Lab / random-promoter-dream-challenge-2022
  ☆29Updated 4 months ago
• mnielLab / NetTCR-2.0
  NetTCR-2.0. Sequence-based prediction of peptide-TCR binding
  ☆34Updated 3 years ago
• ntranoslab / esm-variants
  ☆74Updated last year
• xiongxslab / Translatomer
  ☆20Updated 3 months ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆37Updated 2 years ago
• pinellolab / EPInformer
  code to run EPInformer for gene expression prediction and gene-enhancer links prioritization
  ☆43Updated 6 months ago
• kekegg / DLEPS
  A Deep Learning based Efficacy Prediction System for drug discovery
  ☆66Updated 2 years ago
• johli / aparent
  APA Regression Net - Predict and Engineer Alternative Polyadenylation
  ☆39Updated 3 years ago
• kundajelab / DART-Eval
  ☆34Updated last month
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆80Updated 2 years ago
• GET-Foundation / get_model
  A modular framework for multimodal cross-cell-type transcriptional regulation models
  ☆75Updated last month
• bernardo-de-almeida / DeepSTARR
  Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Droso…
  ☆63Updated 2 years ago
• ShenLab-Genomics / SpliceTransformer
  SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence
  ☆23Updated 6 months ago
• sunyolo / DeepTFni
  A VGAE-based model to infer transcription factor regulatory network
  ☆27Updated 2 years ago
• Carldeboer / CisRegModels
  Scripts for building computational models of gene regulation with tensorflow
  ☆10Updated 5 years ago
• mhorlacher / rbpnet
  ☆18Updated last year
• XinmingTu / Awesome-Bio-ML-PKU
  This is a repo that includes some resources about machine learning and the application in biology. We are students/alumni of Peking Unive…
  ☆15Updated 5 years ago
• liu-bioinfo-lab / EPCOT
  ☆22Updated last year
• johahi / borzoi-pytorch
  Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.
  ☆56Updated 2 weeks ago
• jzhoulab / puffin
  deep learning-inspired explainable sequence model for transcription initiation
  ☆94Updated 3 months ago
• Hughes-Genome-Group / deepC
  A neural network framework for predicting the Hi-C chromatin interactions from megabase scale DNA sequence
  ☆33Updated last year
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆43Updated 2 years ago
• IdoSpringer / ERGO-II
  ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction
  ☆32Updated 3 years ago
• bioinformatics-sannio / ncrna-deep
  Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"
  ☆15Updated 4 years ago
• vagarwal87 / Xpresso
  Predicting gene expression levels from genomic sequences
  ☆53Updated 4 years ago
• lanagarmire / Asgard
  ☆42Updated last year
• wassermanlab / ExplaiNN
  ExplaiNN: interpretable and transparent neural networks for genomics
  ☆48Updated 2 months ago
• LabShengLi / sci
  ☆16Updated 2 years ago