Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.
☆86May 22, 2026Updated 3 months ago
Alternatives and similar repositories for fastTopics
Users that are interested in fastTopics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A R package for Grade of Membership model and Visualization of counts data:☆33Jan 15, 2021Updated 5 years ago
- A faster and angrier package for EBMF.☆17Jul 1, 2026Updated 2 months ago
- R package for fast maximum-likelihood estimation of mixture proportions using SQP.☆11Dec 21, 2023Updated 2 years ago
- R package for adaptive correlation and covariance matrix shrinkage.☆23Jan 23, 2019Updated 7 years ago
- Multivariate adaptive shrinkage methods used for analysis GTEx data in Urbut et al (2017).☆12Sep 25, 2017Updated 8 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Dec 12, 2018Updated 7 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆12Feb 25, 2022Updated 4 years ago
- Fit Gamma-Poisson Generalized Linear Models Reliably☆126May 26, 2026Updated 3 months ago
- Dynamic statistical comparisons in R☆17Jun 29, 2018Updated 8 years ago
- Repo for Dynamic Statistical Comparisons project☆13Feb 5, 2024Updated 2 years ago
- Similarity search in heterogeneous knowledge graphs using meta paths.☆31Mar 11, 2023Updated 3 years ago
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆10Oct 7, 2020Updated 5 years ago
- Repel Visually Similar Colors for Colorblind Users (CRAN)☆11Aug 22, 2026Updated 3 weeks ago
- R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …☆25Oct 3, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Flexible, probablistic metrics for quality control of scRNA-seq data☆23May 27, 2026Updated 3 months ago
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆23Jun 10, 2025Updated last year
- Analysis of cell-cell communication at single-cell resolution☆108Sep 10, 2024Updated 2 years ago
- Tools for building new GAM models in mgcv☆19Jul 14, 2026Updated 2 months ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆18Jun 28, 2025Updated last year
- Rcpp Machine Learning: Fast robust NMF, divisive clustering, and more☆123Apr 6, 2026Updated 5 months ago
- An R package for multivariate adaptive shrinkage.☆101Nov 7, 2024Updated last year
- 'alto' is an R package that aligns topics from different LDA models, computes metrics for quantifying the goodness of alignment, and prov…☆18May 13, 2026Updated 4 months ago
- ☆14Mar 20, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- XPtr Add-Ons for 'Rcpp'☆19Jul 21, 2025Updated last year
- ☆11Aug 21, 2024Updated 2 years ago
- logistic factor analysis☆16Jan 29, 2026Updated 7 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Mar 25, 2024Updated 2 years ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated last year
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆311Jun 30, 2026Updated 2 months ago
- Gaussian processes in TensorFlow via R☆16Sep 10, 2017Updated 9 years ago
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Apr 11, 2023Updated 3 years ago
- A clusterability measure for scRNA-seq data.☆20Feb 2, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆156Jun 26, 2026Updated 2 months ago
- R package for Empirical Bayes Factor Analysis.☆54Dec 4, 2024Updated last year
- Various Ideas for Confounder Adjustment in Regression☆24May 8, 2023Updated 3 years ago
- An R package for adaptive shrinkage☆88May 4, 2026Updated 4 months ago
- Non Metric Space ( Approximate ) Library in R☆12Feb 2, 2023Updated 3 years ago
- .h5mu files interface for Seurat☆35Nov 28, 2023Updated 2 years ago
- Tidy methods for Bayesian treatment effect models☆17Sep 3, 2026Updated 2 weeks ago