meuleman / epilogosLinks
Methods for summarizing and visualizing multi-biosample functional genomic annotations
☆46Updated 9 months ago
Alternatives and similar repositories for epilogos
Users that are interested in epilogos are comparing it to the libraries listed below
Sorting:
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 4 years ago
- Differential ATAC-seq toolkit☆27Updated 2 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆30Updated 2 years ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆41Updated 2 months ago
- Fluff is a Python package that contains several scripts to produce pretty, publication-quality figures for next-generation sequencing exp…☆71Updated last year
- JAMM Peak Finder for Sequencing Datasets☆30Updated 5 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆42Updated last year
- Create QC and summary reports for Alevin output☆31Updated last month
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Updated 3 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- A tool for fast and accurate summarizing of variant calling format (VCF) files☆61Updated 3 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 6 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆55Updated 2 months ago
- ☆30Updated 6 months ago
- simplified cellranger for long-read data☆19Updated 4 months ago
- Code and data used to create the JASPAR UCSC Genome Browser tracks data hub☆18Updated last month
- Chromatin segmentation in R☆19Updated 7 years ago
- The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating fro…☆36Updated last year
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆67Updated 5 years ago
- a peak-calling and differential analysis tool for replicated ChIP-Seq data☆37Updated 3 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆29Updated 4 years ago
- create, manage, and upload track hubs for use in the UCSC genome browser☆54Updated last year
- A tool for Read Multi-Mapper Resolution☆24Updated 8 years ago
- Transcript quantification import with automatic metadata detection☆67Updated last week
- iread☆25Updated 4 years ago