voyn / transalyzerLinks
Matlab GUI based package for nanopore signal analysis
☆25Updated 7 years ago
Alternatives and similar repositories for transalyzer
Users that are interested in transalyzer are comparing it to the libraries listed below
Sorting:
- ☆15Updated 8 months ago
- "nanoCEM" is a simple tool designed to visualize the features that distinguish between two groups of ONT data at the site level.☆17Updated last month
- SegPore is a software to segment the raw signal of nanopore direct RNA sequencing and estimate the RNA modifications.☆12Updated 3 months ago
- End-to-end simulation of nanopore sequencing signals with feed-forward transformers☆16Updated last week
- Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing☆15Updated 3 months ago
- Realtime base modification frequency tool☆12Updated 2 months ago
- Versatile simulator for structural variance and Nanopore/PacBio sequencing reads☆27Updated 3 months ago
- Determining tandem repeat lengths using raw nanopore signals.☆15Updated 2 years ago
- Nanopore direct RNA basecaller☆11Updated 3 years ago
- Codes and results from ONT dRNA benchmarking☆11Updated 2 years ago
- BaseNet: A Transformer-Based Toolkit for Nanopore Sequencing Signal Decoding☆13Updated 3 months ago
- Xron - an omni basecaller for ONT reads.☆22Updated last year
- ☆12Updated 5 months ago
- A fully convolutional architecture for basecalling nanopore RNA sequencing data☆11Updated last year
- Building a Chinese pan-genome of 486 individuals☆11Updated 3 years ago
- A segmentation toolkit for segment the Nanopore RNA signal.☆19Updated 9 months ago
- ☆14Updated 2 years ago
- ☆29Updated 2 years ago
- Python3 Read Until API implementation☆11Updated 5 years ago
- Scripts for identifying sites with differential error rates in mapped nanopore DRS data☆11Updated 5 years ago
- Codec for DNA data storage able to correct substitutions, deletions, insertions and fragment loss with constraint adherence.☆15Updated 10 months ago
- NanoSim-H: a simulator of Oxford Nanopore reads; a fork of NanoSim.☆18Updated 3 years ago
- Tools used to analyze data from nanopore-based experiments.☆31Updated 10 years ago
- ☆11Updated last year
- Giraffe_View is designed to help assess and visualize the accuracy of long-read sequencing datasets.☆13Updated last year
- ☆10Updated 8 months ago
- MODAS: Multi-Omics Data Association Study toolkit☆21Updated last year
- Yet another nanopore modification comparison tool☆12Updated 3 years ago
- Construct a Physical Map from Linked Reads☆18Updated last year
- Python library to identify Identical By State regions☆16Updated 2 years ago