Repository for code and models for the paper "Extrapolative Controlled Sequence Generation via Iterative Refinement"
☆16Mar 5, 2024Updated 2 years ago
Alternatives and similar repositories for iter-extrapolation
Users that are interested in iter-extrapolation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆33Oct 31, 2022Updated 3 years ago
- This repository implements Gibbs sampling with Graph-based Smoothing☆42May 29, 2024Updated 2 years ago
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆25Sep 18, 2025Updated last year
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Jan 5, 2024Updated 2 years ago
- Implementation of Tranception, an attention network, paired with retrieval, that is SOTA for protein fitness prediction☆32Jun 19, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Protein Design with Guided Discrete Diffusion☆144Feb 21, 2024Updated 2 years ago
- Neural networks to model BCR affinity maturation☆19May 11, 2026Updated 4 months ago
- DiffusER: Discrete Diffusion via Edit-based Reconstruction (Reid, Hellendoorn & Neubig, 2022)☆55Aug 3, 2025Updated last year
- Design and analyze optimal deep learning models.☆30Aug 2, 2025Updated last year
- A library of discrete objectives☆27Oct 5, 2025Updated 11 months ago
- ☆34May 1, 2025Updated last year
- Official repository for discrete Walk-Jump Sampling (dWJS)☆62Jun 3, 2024Updated 2 years ago
- Transfer learning for Mutation Effect Prediction☆17Feb 13, 2024Updated 2 years ago
- ☆15Oct 28, 2025Updated 10 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- This repository is the official implementation of Bidirectional Learning for Offline Infinite-width Model-based Optimization (NeurIPS 202…☆14Jan 19, 2023Updated 3 years ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆141Apr 23, 2026Updated 5 months ago
- ☆19Mar 6, 2024Updated 2 years ago
- Drug Discovery under Covariate Shift with Domain-Informed Prior Distributions over Functions☆24Jul 13, 2023Updated 3 years ago
- Official repository for "Plug & Play Directed Evolution for Proteins with Gradient-Based Discrete MCMC"☆12Jul 18, 2023Updated 3 years ago
- Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion☆19Feb 8, 2024Updated 2 years ago
- PyTorch implementation for our paper "Proximal Exploration for Model-guided Protein Sequence Design"☆39Aug 7, 2023Updated 3 years ago
- ☆19Mar 31, 2024Updated 2 years ago
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Sep 18, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Inference-Time Alignment in Protein Diffusion Models☆59Jan 7, 2026Updated 8 months ago
- Canonical normalizing flows☆10Apr 30, 2019Updated 7 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆136Nov 19, 2025Updated 10 months ago
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆23Aug 8, 2024Updated 2 years ago
- Aligning protein generative models with experimental fitness☆152Mar 12, 2026Updated 6 months ago
- This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.☆23Jun 26, 2023Updated 3 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 7 months ago
- Epistatic Net is an algorithm which allows for spectral regularization of deep neural networks to predict biological fitness functions (e…☆18Jul 20, 2021Updated 5 years ago
- ☆19Jun 27, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆22Feb 25, 2025Updated last year
- The page with all info about SOTA text detoxification models and datasets.☆14Apr 2, 2025Updated last year
- Build DeepSea training dataset from raw data☆32Jul 6, 2023Updated 3 years ago
- [NeurIPS 2023] Official code release accompanying the paper "NetHack is Hard to Hack" (Piterbarg, Pinto, Fergus)☆13Oct 30, 2023Updated 2 years ago
- ☆78Aug 23, 2023Updated 3 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆28Aug 9, 2023Updated 3 years ago
- Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.☆26May 9, 2024Updated 2 years ago