salesforce / genhance
☆32Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for genhance
- Replication attempt for the Protein Folding Model described in https://www.biorxiv.org/content/10.1101/2021.08.02.454840v1☆37Updated 2 years ago
- ☆34Updated 4 years ago
- ☆25Updated 2 years ago
- Implementation of Geometric Vector Perceptron, a simple circuit for 3d rotation equivariance for learning over large biomolecules, in Pyt…☆72Updated 3 years ago
- Source code for ICLR 2021 paper: "Molecule Optimization by Explainable Evolution"☆28Updated 3 years ago
- A Modular Architecture for Deep Learning Systems☆38Updated last month
- This repository contains code for reproducing results in our paper Interpreting Potts and Transformer Protein Models Through the Lens of …☆56Updated 2 years ago
- RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma …☆93Updated last year
- Pytorch reimplementation of Molecule Attention Transformer, which uses a transformer to tackle the graph-like structure of molecules☆58Updated 3 years ago
- Energy-based models for atomic-resolution protein conformations☆95Updated 2 years ago
- Implementation of Tranception, an attention network, paired with retrieval, that is SOTA for protein fitness prediction☆31Updated 2 years ago
- To be a next-generation DL-based phenotype prediction from genome mutations.☆19Updated 3 years ago
- Implementation of Denoising Diffusion for protein design, but using the new Equiformer (successor to SE3 Transformers) with some addition…☆56Updated last year
- Implementation of the Triangle Multiplicative module, used in Alphafold2 as an efficient way to mix rows or columns of a 2d feature map, …☆29Updated 3 years ago
- Epistatic Net is an algorithm which allows for spectral regularization of deep neural networks to predict biological fitness functions (e…☆17Updated 3 years ago
- pytorch implementation of trDesign☆45Updated 3 years ago
- Exploring Evolution-aware & free protein language models as protein function predictors☆60Updated last month
- Implementation and replication of ProGen, Language Modeling for Protein Generation, in Jax☆109Updated 3 years ago
- Code for 'On Pre-trained Language Models For Antibody'☆30Updated last year
- Code for Fold2Seq paper from ICML 2021☆49Updated 2 years ago
- Implementation of trRosetta and trDesign for Pytorch, made into a convenient package, for protein structure prediction and design☆80Updated 3 years ago
- Implementation of the DDPM + IPA (invariant point attention) for protein generation, as outlined in the paper "Protein Structure and Sequ…☆86Updated 2 years ago
- [ICLR 2023] "HotProtein: A Novel Framework for Protein Thermostability Prediction and Editing" by Tianlong Chen*, Chengyue Gong*, Daniel …☆27Updated last year
- Retrieved Sequence Augmentation for Protein Representation Learning☆45Updated last year
- Repository for code and models for the paper "Extrapolative Controlled Sequence Generation via Iterative Refinement"☆15Updated 8 months ago
- Open source code for AlphaFold to extract protein embeddings☆25Updated 3 years ago
- DistilProtBert implementation, a distilled version of ProtBert model.☆15Updated 2 years ago
- Learning to Split for Automatic Bias Detection☆47Updated last year