☆15Mar 27, 2024Updated last year
Alternatives and similar repositories for GEP
Users that are interested in GEP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"☆13Mar 28, 2021Updated 4 years ago
- ☆14May 16, 2025Updated 10 months ago
- ☆28Oct 15, 2024Updated last year
- ☆20Jun 10, 2024Updated last year
- Protein-Protein Docking using Genetic Algorithm☆20Mar 9, 2026Updated 2 weeks ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Implementation of Protein Invariant Point Packer (PIPPack)☆35May 28, 2024Updated last year
- Structure-based fragment identification in latent space☆30Mar 4, 2026Updated 3 weeks ago
- Official repository for Cell Attention Networks☆14Jan 11, 2024Updated 2 years ago
- ☆10Apr 30, 2025Updated 10 months ago
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆10Jan 7, 2026Updated 2 months ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆13Jul 4, 2024Updated last year
- Code for the paper "Learning to engineer protein flexibility".☆22Jan 21, 2026Updated 2 months ago
- Toolkit for alphafold3 input and output files☆97Mar 1, 2026Updated 3 weeks ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Data Processing Kitchen Sink for proteomics data☆13Jan 13, 2026Updated 2 months ago
- ☆19Nov 28, 2025Updated 3 months ago
- ☆31Nov 23, 2025Updated 4 months ago
- A standardized protein design benchmark for motif-scaffolding problems☆76Jan 27, 2026Updated last month
- ☆135Jun 3, 2025Updated 9 months ago
- ☆19Apr 14, 2025Updated 11 months ago
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆189Mar 1, 2026Updated 3 weeks ago
- Solving various PDEs by employing Siren, with JAX implementation.☆11Apr 13, 2025Updated 11 months ago
- Implementation of AlphaFold 3 in PyTorch Lightning + Hydra☆39Oct 4, 2024Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Official repo of the modular BioExcel version of HADDOCK☆228Updated this week
- Drug Discovery under Covariate Shift with Domain-Informed Prior Distributions over Functions☆24Jul 13, 2023Updated 2 years ago
- Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with Attention☆58Mar 3, 2026Updated 3 weeks ago
- A Multi-Task Generative model for Structure-Based Drug Design☆60Mar 18, 2026Updated last week
- A Versatile and Open Source One- and Two-Photon Light-Sheet Microscope Design☆14Jul 27, 2023Updated 2 years ago
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆89Dec 4, 2023Updated 2 years ago
- Code fo ICLR2025 paper "A Simple yet Effective DDG Predictor is An Unsupervised Antibody Optimizer and Explainer"☆22Jul 18, 2025Updated 8 months ago
- ☆24May 26, 2025Updated 10 months ago
- ☆15Sep 29, 2025Updated 5 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Aligning protein generative models with experimental fitness☆120Mar 12, 2026Updated 2 weeks ago
- ☆15Dec 9, 2024Updated last year
- P2DFlow: A Protein Ensemble Generative Model with SE(3) Flow Matching☆44May 22, 2025Updated 10 months ago
- ☆32Mar 19, 2023Updated 3 years ago
- Python Toolbox For Rosetta Silent Files Processing☆10Aug 2, 2021Updated 4 years ago
- PointSite: a point cloud segmentation tool for identification of protein ligand binding atoms☆57Mar 9, 2023Updated 3 years ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated 11 months ago