EleutherAI / mp_nerf
Massively-Parallel Natural Extension of Reference Frame
☆29Updated last year
Related projects: ⓘ
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆52Updated 4 months ago
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆26Updated 3 months ago
- SE(3)-equivariant point cloud networks for virtual screening☆20Updated last year
- FrameDiPT: an SE(3) diffusion model for protein structure inpainting☆49Updated 7 months ago
- The official implementation of Energy-Inspired Molecular Conformation Optimization (ICLR 2022)☆37Updated last year
- ☆23Updated 4 months ago
- Code for the paper Context-Guided Diffusion for Out-of-Distribution Molecular and Protein Design☆32Updated 2 months ago
- Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion☆14Updated 7 months ago
- PyTorch implementation for our paper "Proximal Exploration for Model-guided Protein Sequence Design"☆35Updated last year
- Code pipeline for the PaccMann^RL in iScience: https://www.cell.com/iscience/fulltext/S2589-0042(21)00237-6☆30Updated 2 years ago
- Cython implementation of PDB -> DataFrame parsing☆19Updated last year
- Implementation of Protein Invariant Point Packer (PIPPack)☆30Updated 3 months ago
- ☆12Updated 2 months ago
- dMaSIF implementation for google colab☆29Updated last year
- Tool for modelling the CDRs of antibodies☆32Updated last year
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. https…☆60Updated this week
- ☆34Updated 5 years ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆23Updated 9 months ago
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆44Updated last year
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆27Updated 2 months ago
- Learning with uncertainty for biological discovery and design☆33Updated last year
- Autoregressive networks for protein☆31Updated 5 months ago
- Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning☆25Updated 4 months ago
- ☆35Updated 6 months ago
- protein backbone refinement☆11Updated last week
- Benchmark for Biophysical Sequence Optimization Algorithms☆12Updated 2 months ago
- Drug Discovery under Covariate Shift with Domain-Informed Prior Distributions over Functions☆23Updated last year
- A PyTorch implementation of Geometry-Complete SE(3)-Equivariant Perceptron Networks (GCPNets)☆39Updated 4 months ago
- A 3D-equivariant neural network for protein structure accuracy estimation☆18Updated last year
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆27Updated last year