Alternatives and similar repositories for MetDNA2

Users that are interested in MetDNA2 are comparing it to the libraries listed below

• LiChenPU / NetID
  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
  ☆48Updated 2 years ago
• zhengfj1994 / MetEx
  MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.
  ☆17Updated last year
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆25Updated last month
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• ZhuMSLab / DecoMetDIA
  ☆12Updated 3 years ago
• idrblab / NOREVA
  R Package for Systematic Optimization of Metabolomic Data Processing
  ☆17Updated 6 months ago
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆22Updated 4 years ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆42Updated last year
• bittremieux-lab / GLEAMS
  GLEAMS is a Learned Embedding for Annotating Mass Spectra.
  ☆26Updated 2 years ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆12Updated 4 years ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• ZhuMSLab / MetDNA
  All the source code of MetDNA.
  ☆18Updated 3 years ago
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated last year
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆30Updated last year
• wilsontom / msconverteR
  Create .mzML files through the R Console
  ☆11Updated 2 months ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆27Updated 2 years ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• rickhelmus / patRoon
  Workflow solutions for mass-spectrometry based non-target analysis.
  ☆68Updated last week
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆54Updated this week
• SlavovLab / plexDIA
  Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.
  ☆12Updated 7 months ago
• vsegurar / DeepMSPeptide
  ☆18Updated 6 years ago
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆34Updated 4 years ago
• MarcIsak / MSLibrarian
  MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics
  ☆14Updated 3 years ago
• ipb-halle / MetFragR
  R package for MetFrag
  ☆23Updated 8 years ago
• systemsomicslab / mtbinfo.github.io
  ☆30Updated last year
• zhengfj1994 / MRM-Ion_Pair_Finder
  Defined MRM transitions from untargeted metabolomics data
  ☆10Updated last year
• Functional-Metabolomics-Lab / FBMN-STATS
  FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks
  ☆40Updated 4 months ago
• kentsislab / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆27Updated 7 years ago