An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
☆98Jan 23, 2024Updated 2 years ago
Alternatives and similar repositories for Peptides
Users that are interested in Peptides are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆116Sep 4, 2025Updated 6 months ago
- ☆14Jul 12, 2021Updated 4 years ago
- Virtual machine with all software and sample data to run 3D-e-Chem Knime workflows☆17Sep 27, 2018Updated 7 years ago
- Modeling framework for eTRANSAFE project☆13Aug 6, 2025Updated 7 months ago
- ☆28Oct 27, 2021Updated 4 years ago
- 🧬 Toolkit for generating various numerical features of protein sequences☆53Aug 25, 2025Updated 6 months ago
- antimicrobial peptide prediction in R☆33Dec 17, 2024Updated last year
- iFeature is a comprehensive Python-based toolkit for generating various numerical feature representation schemes from protein or peptide …☆195May 23, 2022Updated 3 years ago
- Rotamer Interaction Field Python Libraries for Computational Protein Design☆13Feb 2, 2018Updated 8 years ago
- ☆12Oct 29, 2025Updated 4 months ago
- The BioJS MSA viewer wrapped into an R package☆12Sep 27, 2016Updated 9 years ago
- Freelance bioinformaticians directory☆10Feb 10, 2023Updated 3 years ago
- Target prediction☆13May 8, 2020Updated 5 years ago
- Python Modeling Interface☆14Dec 18, 2025Updated 3 months ago
- KIF - Key Interactions Finder. A python package to identify the key molecular interactions that regulate any conformational change.☆34Jan 6, 2026Updated 2 months ago
- Python interface to amino acid properties and IEDB☆57Oct 7, 2024Updated last year
- LipidCreator is a powerful stand alone kick-off tool for targeted lipidomics and a plugin for Skyline. It provides convenient tools to ge…☆11Feb 26, 2026Updated 3 weeks ago
- AstraZeneca add-ons to Orange.☆23Jun 15, 2020Updated 5 years ago
- AutoCorrelation of Pharmacophore Features☆15Mar 6, 2023Updated 3 years ago
- Program to create tautomers and ionisation states relevant to physiological pH.☆10May 8, 2017Updated 8 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆26Aug 16, 2023Updated 2 years ago
- A software package for computing features of peptides and proteins☆66Jun 7, 2024Updated last year
- ☆14Oct 16, 2022Updated 3 years ago
- some useful scripts for working with genomics and sequencing data☆17Oct 31, 2019Updated 6 years ago
- iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…☆31Jun 25, 2022Updated 3 years ago
- Standardization workflow for QSAR-ready chemical structures pre-treatment. See "release" tab for the latest version and sample files!☆22Oct 2, 2024Updated last year
- Predict AMPs in (meta)genomes and peptides☆90Nov 24, 2025Updated 4 months ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆29Feb 12, 2021Updated 5 years ago
- Updated version of Silicos-it's shape-based alignment tool☆47Sep 27, 2025Updated 5 months ago
- mirror of https://zhanglab.ccmb.med.umich.edu/EDTSurf/☆10Jun 20, 2023Updated 2 years ago
- The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of …☆21Oct 2, 2025Updated 5 months ago
- ☆11Aug 5, 2020Updated 5 years ago
- fragbuilder is a tool to create, setup and analyze QM calculations on peptides.☆15Oct 31, 2014Updated 11 years ago
- Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.☆77Mar 25, 2023Updated 2 years ago
- iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of auto…☆123Apr 15, 2024Updated last year
- A Python package for extracting protein sequence features☆62Aug 23, 2022Updated 3 years ago
- 🐶 hlabud: HLA genotype analysis in R☆17Apr 11, 2025Updated 11 months ago
- Visualizing publication-quality multiple sequence alignment using ggplot2☆217Nov 1, 2025Updated 4 months ago
- R package for microbial pangenomics☆24Apr 12, 2022Updated 3 years ago