Alternatives and similar repositories for ZeroCostDL4Mic:

Users that are interested in ZeroCostDL4Mic are comparing it to the libraries listed below

• CSBDeep / CSBDeep
  Image restoration for fluorescence microscopy
  ☆304Updated 6 months ago
• stardist / stardist
  StarDist - Object Detection with Star-convex Shapes
  ☆1,025Updated 6 months ago
• clEsperanto / pyclesperanto_prototype
  GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data
  ☆224Updated 2 months ago
• MouseLand / cellpose
  a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
  ☆1,579Updated this week
• vanvalenlab / deepcell-tf
  Deep Learning Library for Single Cell Analysis
  ☆446Updated 7 months ago
• SchmollerLab / Cell_ACDC
  A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data
  ☆156Updated this week
• computational-cell-analytics / micro-sam
  Segment Anything for Microscopy
  ☆527Updated this week
• BiAPoL / Bio-image_Analysis_with_Python
  Lecture materials "Bio-image analysis, biostatistics, programming and machine learning for computational biology" at the Center of Molecu…
  ☆207Updated last year
• imagej / pyimagej
  Use ImageJ from Python
  ☆499Updated this week
• RMS-DAIM / Python-for-Bioimage-Analysis
  This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…
  ☆133Updated 5 years ago
• vanvalenlab / intro-to-deepcell
  An introduction to deepcell and deep learning
  ☆145Updated 6 months ago
• haesleinhuepf / BioImageAnalysisNotebooks
  Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more
  ☆135Updated 3 weeks ago
• sartorius-research / LIVECell
  ☆187Updated last year
• BiaPyX / BiaPy
  Open source Python library for building bioimage analysis pipelines
  ☆144Updated last week
• haesleinhuepf / stackview
  Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets
  ☆149Updated 2 weeks ago
• trackmate-sc / TrackMate
  TrackMate is your buddy for your everyday tracking.
  ☆188Updated 2 weeks ago
• CellProfiler / tutorials
  CellProfiler tutorial pipelines and images
  ☆93Updated this week
• zeiss-microscopy / OAD
  Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…
  ☆133Updated last month
• kreshuklab / plant-seg
  A tool for cell instance aware segmentation in densely packed 3D volumetric images
  ☆111Updated 2 weeks ago
• royerlab / ultrack
  Cell tracking and segmentation software
  ☆110Updated this week
• hallvaaw / awesome-biological-image-analysis
  A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.
  ☆143Updated last month
• guiwitz / neubias_academy_biapy
  NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter
  ☆62Updated last year
• HenriquesLab / DL4MicEverywhere
  Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images
  ☆76Updated this week
• WhoIsJack / python-bioimage-analysis-tutorial
  A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.
  ☆97Updated 2 years ago
• AllenCellModeling / aicsimageio
  Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python
  ☆213Updated 3 months ago
• vanvalenlab / deepcell-label
  Cloud-based data annotation tools for biological images
  ☆79Updated last year
• royerlab / napari-chatgpt
  A napari plugin to process and analyse images with chatGPT!
  ☆273Updated 6 months ago
• HenriquesLab / DeepBacs
  ☆31Updated 2 years ago
• segment-anything-models-java / SAMJ-IJ
  An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.
  ☆65Updated 2 weeks ago
• instanseg / instanseg
  ☆156Updated this week