☆213Jun 29, 2023Updated 2 years ago
Alternatives and similar repositories for LIVECell
Users that are interested in LIVECell are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A style-aware deep learning model for adaptive cell instance segmentation by contrastive fine-tuning.☆10Apr 19, 2024Updated 2 years ago
- a generalist algorithm for cellular segmentation with human-in-the-loop capabilities☆2,234Jun 9, 2026Updated last week
- Deep Learning Library for Single Cell Analysis☆476Jun 4, 2026Updated last week
- ☆88Dec 2, 2019Updated 6 years ago
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆127Feb 14, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- An introduction to deepcell and deep learning☆155Oct 21, 2024Updated last year
- ☆19Aug 24, 2021Updated 4 years ago
- A Python package using Gromov-Wasserstein distance to compare cell shapes☆25Updated this week
- Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning☆205Sep 15, 2020Updated 5 years ago
- open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition☆30Apr 5, 2022Updated 4 years ago
- Learn morphological states of dynamic cells☆13Apr 16, 2023Updated 3 years ago
- Bayesian multi-object tracking☆334Apr 1, 2026Updated 2 months ago
- StarDist - Object Detection with Star-convex Shapes☆1,225Feb 14, 2026Updated 4 months ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development☆33May 3, 2023Updated 3 years ago
- [MICCAI 2019] Multi-scale Cell Instance Segmentation with Keypoint Graph based Bounding Boxes☆83Dec 4, 2019Updated 6 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆73Sep 29, 2024Updated last year
- The code of SRIBD-Med Team for NeurIPS2022 Cell Segmentation Challenge☆15Jul 23, 2023Updated 2 years ago
- Cell tracker designed for tracking intestinal organoids☆37Jun 10, 2026Updated last week
- Segment Anything for Microscopy☆691Updated this week
- ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy☆645Mar 29, 2026Updated 2 months ago
- [Medical Image Analysis 2019] Attentive Neural Cell Instance Segmentation☆46Feb 6, 2022Updated 4 years ago
- Sub-cellular spatial transcriptomics Cell Segmentation☆70Oct 1, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Deeply supervised density regression for automatic cell counting in microscopy images☆12Jan 31, 2022Updated 4 years ago
- ☆17Jun 15, 2023Updated 3 years ago
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truth☆41Jun 8, 2026Updated last week
- Workshop materials for "Images to Knowledge with ImageJ and Friends" 2020 conference☆13Apr 26, 2022Updated 4 years ago
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆148May 2, 2026Updated last month
- ☆18May 5, 2023Updated 3 years ago
- Open-source ImageJ plugin to quantify cardiomyocyte and cardiac muscle contraction in vitro and in vivo☆15Apr 16, 2021Updated 5 years ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- ☆31Jun 28, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Cell tracking using TensorFlow and BayesianTracker☆23Jan 17, 2022Updated 4 years ago
- StarDist PyTorch☆46Nov 13, 2022Updated 3 years ago
- Website for the BioImage Model zoo -- a model zoo for bioimage analysis.☆59Jun 30, 2025Updated 11 months ago
- Advanced Tool for Labeling And Segmentation☆41Oct 21, 2024Updated last year
- Google Colab notebook for Cellpose☆11Aug 21, 2025Updated 9 months ago
- Cookiecutter for napari plugins☆73Nov 6, 2024Updated last year
- Python nd2 reader based on the ND2 SDK☆17Jan 28, 2022Updated 4 years ago