sartorius-research / LIVECell
☆188Updated last year
Alternatives and similar repositories for LIVECell
Users that are interested in LIVECell are comparing it to the libraries listed below
Sorting:
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆114Updated last year
- (NeurIPS 2022 CellSeg Challenge - 1st Winner) Open source code for "MEDIAR: Harmony of Data-Centric and Model-Centric for Multi-Modality …☆151Updated last year
- An introduction to deepcell and deep learning☆146Updated 6 months ago
- Codebase for "A Foundation Model for Cell Segmentation"☆87Updated last month
- Scalable Instance Segmentation using PyTorch & PyTorch Lightning.☆137Updated 3 weeks ago
- Deep Learning Library for Single Cell Analysis☆449Updated 8 months ago
- Segment Anything for Microscopy☆542Updated this week
- A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data☆158Updated this week
- CellViT: Vision Transformers for Precise Cell Segmentation and Classification☆290Updated last month
- Cloud-based data annotation tools for biological images☆79Updated last year
- Stain normalization tools for histological analysis and computational pathology☆144Updated 4 months ago
- PyTorch implementation of several neural network models for cellular image segmentation☆47Updated 5 years ago
- Interactive Segmentation of Nucleus☆63Updated 2 years ago
- ☆164Updated 3 weeks ago
- Open source Python library for building bioimage analysis pipelines☆167Updated last week
- A tool for cell instance aware segmentation in densely packed 3D volumetric images☆111Updated last week
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆94Updated this week
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆112Updated this week
- PAthological QUpath Obsession - QuPath and Python conversations☆115Updated 4 months ago
- Encoder-Decoder Cell and Nuclei segmentation models☆91Updated last week
- GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data☆225Updated 2 months ago
- Virtual Alignment of pathoLogy Image Series☆156Updated 5 months ago
- Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, …☆193Updated 2 weeks ago
- StarDist PyTorch☆47Updated 2 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆67Updated 2 years ago
- QuPath extension for Segment Anything Model (SAM)☆107Updated 2 months ago
- A pipeline to segment tissue from the background in histological images☆69Updated 2 years ago
- U-net based segmentation of nuclei in microscopy images☆53Updated 6 years ago
- Three dimensional cross-modal image inference☆155Updated 4 years ago
- NuSeT: A Deep Learning Tool for Reliably Separating and Analyzing Crowded Cells☆20Updated 4 years ago