ubiome-opensource / microbiome-dataLinks
For anyone who wants to share and compare their microbiome data.
☆29Updated 9 years ago
Alternatives and similar repositories for microbiome-data
Users that are interested in microbiome-data are comparing it to the libraries listed below
Sorting:
- For tool creators to share their inventions that analyze, visualize, and make meaning of microbiome data.☆66Updated 8 years ago
- useful tools for manipulating uBiome information☆45Updated 7 years ago
- Emperor a tool for the analysis and visualization of large microbial ecology datasets☆55Updated last year
- Streaming fragment assignment and quantification for high-throughput sequencing.☆35Updated 5 years ago
- Deprecated : Use https://github.com/drpowell/degust☆44Updated 8 years ago
- METAREP: JCVI Metagenomics Reports - an open source tool for high-performance comparative metagenomics☆26Updated 12 years ago
- Quality control methods for human genomic variants.☆62Updated 2 years ago
- Tools for phylogenetic data analysis including visualization and cluster-computing support.☆14Updated 3 years ago
- Perform microbiome-wide association studies with a variety of models☆18Updated 8 years ago
- A collection of well-known bioinformatics programs.☆25Updated 10 years ago
- Pathoscope: Species identification and strain attribution with unassembled sequencing data☆57Updated 6 years ago
- Virus metagenomic pipeline for unknown host or in absence of a host genome☆18Updated 5 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- The CRISPR assembler☆35Updated 4 years ago
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 7 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- Efficient handling of FASTQ files from Python☆51Updated last month
- Javascript library for visualizing genomics data with D3.☆19Updated 8 years ago
- Snakemake library for bioinformatics programs, with a focus on next-generation sequencing☆22Updated 9 years ago
- Confirming specific taxonomic groups within your samples.☆19Updated 4 years ago
- Genomics Research Container Architecture☆48Updated 5 years ago
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆46Updated 6 years ago
- A catalogue of docker images for NGS data analysis tools☆9Updated 5 years ago
- The MG-RAST pipeline☆23Updated 2 years ago
- Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies☆26Updated 2 years ago
- Sample Metadata Curation for curatedMetagenomicData☆29Updated 2 weeks ago
- Lesson on data analysis and visualization in R for genomics☆43Updated 6 years ago
- Searching for Horizontal Gene Transfer☆11Updated 5 years ago
- ☆12Updated 8 years ago
- Simple tool to verticalize text delimited files.☆36Updated last year