For anyone who wants to share and compare their microbiome data.
☆28Jun 17, 2016Updated 10 years ago
Alternatives and similar repositories for microbiome-data
Users that are interested in microbiome-data are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- For tool creators to share their inventions that analyze, visualize, and make meaning of microbiome data.☆66Aug 15, 2016Updated 10 years ago
- useful tools for manipulating uBiome information☆45Dec 7, 2017Updated 8 years ago
- Schloss Lab Tools for Reproducible Microbiome Research 💩☆32Aug 22, 2023Updated 3 years ago
- Calculate the normalizing factors for zeroinflated sequencing data such as microbiome sequencing data☆16Jan 31, 2025Updated last year
- Searching for Horizontal Gene Transfer☆10Feb 22, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A lightweight and flexible analysis pipeline☆12Jun 18, 2026Updated 2 months ago
- Workflow for detecting genome-wide horizontal gene transfers☆10May 29, 2018Updated 8 years ago
- Repo for a Microbiome Protocol☆10Apr 26, 2018Updated 8 years ago
- The Microbiome Interpretable Temporal Rule Engine☆46May 26, 2021Updated 5 years ago
- The vignette provided has a basic sketch of the steps we interactively will go through to build a package with devtools, explains version…☆11Jul 29, 2020Updated 6 years ago
- The MG-RAST pipeline☆25Nov 30, 2022Updated 3 years ago
- Very very long reads, indeed☆13Apr 30, 2017Updated 9 years ago
- An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studi…☆34Nov 12, 2020Updated 5 years ago
- Climate change is a controversial topic of debate, where many of us do not believe in anthropogenic climate change. Because its consequen…☆12Sep 20, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Automatically exported from code.google.com/p/ea-utils☆97Jun 8, 2023Updated 3 years ago
- Bioinformatic Tools for analyzing targeted amplicon sequencing developed by Nicholas Hathaway of Bailey Lab☆17Jul 23, 2026Updated last month
- Introduction to R for Clinical Data for the R/Medicine 2022 Virtual Conference☆16Aug 24, 2022Updated 4 years ago
- kaamer - protein identification based on amino acid kmers☆11Mar 7, 2023Updated 3 years ago
- Distributed dynamic process model (DDPM) is a bidirectional coupling eco-hydrological model for (but not limited to) steppe inland river …☆10Jul 9, 2025Updated last year
- MIMIX: a Bayesian Mixed-Effects Model for Microbiome Data from Designed Experiments☆11Jul 9, 2020Updated 6 years ago
- Teaching materials and tutorials for the bioinformatics course thought at the University of Tartu☆19Mar 16, 2026Updated 5 months ago
- Run Python functions locally or in the cloud. Built for computational science.☆22Oct 4, 2023Updated 2 years ago
- QIIME 2 plugin wrapping DADA2☆24Jul 21, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆13Nov 25, 2014Updated 11 years ago
- ☆12Aug 31, 2017Updated 8 years ago
- Coupled model of plant nitrogen demand and rhizosphere carbon allocation (FUN) and soil SOM cycling (CORPSE)☆10May 24, 2017Updated 9 years ago
- mbImpute: an accurate and robust imputation method for microbiome data☆13Aug 19, 2021Updated 5 years ago
- Horizontal Gene Transfer Detection by Mapping Sequencing Reads☆21Aug 31, 2017Updated 8 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Mar 26, 2026Updated 5 months ago
- An example of using Octave on mybinder.org☆15Apr 25, 2025Updated last year
- HTML Table with Group By functionality Implemented using Facebook react.js☆10Aug 1, 2016Updated 10 years ago
- Visualize microbiome data with black magic ggtree☆68Sep 3, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.☆462Feb 13, 2026Updated 6 months ago
- ☆18Updated this week
- Fish shell plugin for fzf git bindings☆10Dec 13, 2021Updated 4 years ago
- A repository for storing code and data related to a systematic comparison of short read taxonomy assignment tools☆16Oct 11, 2017Updated 8 years ago
- the Metagenomic test for Presence Or Absence of Pathways☆13Mar 4, 2019Updated 7 years ago
- renders a KEGGML file and displays a KEGG pathway☆10Jul 14, 2016Updated 10 years ago
- Microbiome analysis☆58Aug 4, 2026Updated 3 weeks ago