Resources for grounding protein families and complexes from text and describing their hierarchical relationships.
☆18Mar 26, 2026Updated 3 months ago
Alternatives and similar repositories for famplex
Users that are interested in famplex are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Mar 9, 2021Updated 5 years ago
- Gene expression viewer template☆12Aug 30, 2017Updated 8 years ago
- Python library (C++ backend) for degree-preserving network randomization☆14Oct 14, 2019Updated 6 years ago
- We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testin…☆11Jul 22, 2019Updated 6 years ago
- Causal inference in non-linear dynamics systems☆16Jun 20, 2017Updated 9 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Representation Learning of Entities and Documents from Knowledge Base Descriptions☆18Oct 6, 2018Updated 7 years ago
- A project to capture biological pathway data from academic papers☆29Mar 24, 2025Updated last year
- Ten quick tips to finish that manuscript that's 90% complete.☆13Mar 30, 2022Updated 4 years ago
- Visualize cancer genomes with FAIR single-cell RNA-seq data☆13Jan 5, 2023Updated 3 years ago
- GitHub pages for GPML-Repo☆11Jul 10, 2026Updated last week
- PyBioPAX: A python implementation of the BioPAX object model☆27May 10, 2024Updated 2 years ago
- A knowledge resource on cell lines - From SIB CALIPHO group☆14Jan 31, 2024Updated 2 years ago
- SCREW: A Reproducible Workflow for Single-Cell Epigenomics☆11Oct 22, 2017Updated 8 years ago
- Goslin is the Grammar on succinct lipid nomenclature.☆13Jun 18, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SmuDGE: Semantic Disease Gene Embeddings☆12Jul 11, 2018Updated 8 years ago
- renders a KEGGML file and displays a KEGG pathway☆10Jul 14, 2016Updated 10 years ago
- WikiPathways Database☆16Updated this week
- 🐸 Idiomatic conversion between URIs and compact URIs (CURIEs) in Python☆27Jul 3, 2026Updated 2 weeks ago
- Tool for disambiguating acronyms and abbreviations in text for NLP applications☆22Mar 26, 2026Updated 3 months ago
- 📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology☆33Dec 16, 2019Updated 6 years ago
- Bio relation extraction labeled dataset☆46Apr 15, 2022Updated 4 years ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Mar 2, 2021Updated 5 years ago
- The Pathway Interaction Database (PID) is software supporting the access and display of information about bio-molecular interactions and …☆15Jun 18, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Jack's dotfiles☆16Jun 11, 2024Updated 2 years ago
- Unsupervised domain adaptation method for relation extraction☆18Jul 16, 2018Updated 8 years ago
- Code associated with MIX-seq manuscript☆15Aug 26, 2020Updated 5 years ago
- HiView: the universal viewer for hierarchical data☆16Mar 23, 2023Updated 3 years ago
- This ontology provides contribution roles for use in crediting persons or organizations.☆24Aug 16, 2023Updated 2 years ago
- Named Entity Recognition for biomedical entities☆48Jan 11, 2023Updated 3 years ago
- ☆10Updated this week
- An example of using Octave on mybinder.org☆15Apr 25, 2025Updated last year
- PathVisio - pathway editor, visualization and analysis software☆27Jan 22, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- CoCoScore: context-aware co-occurrence scores for text mining applications☆20Mar 30, 2019Updated 7 years ago
- 记录日常学习和开发遇到的问题。欢迎评论交流:)☆14Oct 28, 2023Updated 2 years ago
- ☆11Nov 19, 2020Updated 5 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆32Dec 3, 2019Updated 6 years ago
- A collection of algorithms done in JavaScript with visual demos☆11Apr 17, 2023Updated 3 years ago
- INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and datab…☆214Jun 30, 2026Updated 2 weeks ago
- 2019 Toronto Datathon https://www.tdothealthhack.com☆11Oct 4, 2019Updated 6 years ago