mbImpute: an accurate and robust imputation method for microbiome data
☆13Aug 19, 2021Updated 4 years ago
Alternatives and similar repositories for mbImpute
Users that are interested in mbImpute are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Calculate the normalizing factors for zeroinflated sequencing data such as microbiome sequencing data☆16Jan 31, 2025Updated last year
- Statistical quality evaluation of dimensionality reduction algorithms☆30Dec 17, 2025Updated 7 months ago
- Project to study algorithms used to randomize key item locations in computer games.☆12Mar 31, 2021Updated 5 years ago
- Compares pangenome graphs by calculating the segmentation distance between two GFA (Graphical Fragment Assembly) files.☆15Apr 28, 2026Updated 3 months ago
- An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studi…☆34Nov 12, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- R package to quickly obtain count vectors from indexed bam files☆15May 21, 2026Updated 2 months ago
- Download assembly files from NCBI☆12May 9, 2023Updated 3 years ago
- Climate change is a controversial topic of debate, where many of us do not believe in anthropogenic climate change. Because its consequen…☆12Sep 20, 2022Updated 3 years ago
- Common Factor Integration & Transfer learning (cFIT) for single cell RNA-seq data☆13Jul 6, 2021Updated 5 years ago
- BiomeNED main code☆12Jul 25, 2019Updated 7 years ago
- Code and manual of the endoR R-package (Ruaud et al, in preparation).☆11Oct 12, 2023Updated 2 years ago
- Distributed dynamic process model (DDPM) is a bidirectional coupling eco-hydrological model for (but not limited to) steppe inland river …☆10Jul 9, 2025Updated last year
- Uncover organisms' metabolic blueprints☆18Jun 18, 2024Updated 2 years ago
- Microbiome analysis☆58Aug 4, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- MIMIX: a Bayesian Mixed-Effects Model for Microbiome Data from Designed Experiments☆11Jul 9, 2020Updated 6 years ago
- This plugin allows the full state simulator from the Microsoft Quantum Development Toolkit devices to work with PennyLane.☆21Jul 3, 2026Updated last month
- ☆16Nov 5, 2021Updated 4 years ago
- Design and implementation of FAIR Data Cube☆11Jun 2, 2025Updated last year
- A fantastic crate for formatting numbers using the appropriate unicode characters☆15Jan 13, 2026Updated 7 months ago
- ☆22Nov 18, 2025Updated 8 months ago
- Interactive tools for metagenome visualization and binning in R☆27Jun 28, 2018Updated 8 years ago
- Coupled model of plant nitrogen demand and rhizosphere carbon allocation (FUN) and soil SOM cycling (CORPSE)☆10May 24, 2017Updated 9 years ago
- Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/clien…☆12May 28, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A formula interface for model-first PCA; PCA for the people!☆13Aug 23, 2024Updated last year
- TensorFlow-Implementation of Deep Archetypal Analysis☆12Aug 4, 2021Updated 5 years ago
- RDF Community Discussions. Ask anything here!☆13Apr 11, 2024Updated 2 years ago
- Scatterbar - data visualization for proportional data across many spatially resolved coordinates☆12Mar 3, 2025Updated last year
- Test sets and pipeline scripts for pan-genomic graph analysis☆18Jan 30, 2025Updated last year
- ☆16Sep 8, 2024Updated last year
- Deep representation learning for disease prediction based on microbiome data☆65Apr 21, 2023Updated 3 years ago
- An R package for learning log-ratio biomarkers from high-throughput sequencing data.☆23Mar 31, 2023Updated 3 years ago
- Course Notes for PSYC 621 (Bayesian Data Analaysis, 2019 Fall)☆15Jun 5, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox: An extensive set of data (pre-)processing and analysis m…☆11Apr 16, 2026Updated 3 months ago
- This PennyLane plugin allows IonQ simulators/hardware to be used as PennyLane devices.☆21Aug 3, 2026Updated last week
- HORN network model☆21Jun 19, 2026Updated last month
- Bringing core concepts from anywidget to R☆21Aug 10, 2025Updated last year
- R package: Manifold learning in R☆14Apr 7, 2020Updated 6 years ago
- ☆14Apr 4, 2023Updated 3 years ago
- Microbiome-based disease prediction with multimodal variational information bottlenecks, Grazioli et al., PLOS Computational Biology 2022☆25Apr 12, 2022Updated 4 years ago