richardsprague / uBiome
useful tools for manipulating uBiome information
☆45Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for uBiome
- For tool creators to share their inventions that analyze, visualize, and make meaning of microbiome data.☆66Updated 8 years ago
- For anyone who wants to share and compare their microbiome data.☆29Updated 8 years ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆68Updated last year
- A collection of well-known bioinformatics programs.☆25Updated 9 years ago
- Request for comments on interchangeable bioinformatics containers☆40Updated 5 years ago
- Antibiotic resistance predictions in minutes on a laptop☆50Updated 5 years ago
- An Oxford Nanopore Basecaller☆71Updated 3 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 5 years ago
- Genevieve genome report tool☆14Updated last year
- Tools and utilities for running Dockerized metagenomics tools in the Cloud☆23Updated 5 years ago
- ☆9Updated 7 years ago
- blast, shmlast☆21Updated 4 years ago
- A list of weak Bacterial assemblies in GenBank☆18Updated 7 years ago
- MIcrobiomes using Compressive Acceleration☆17Updated 6 years ago
- Load numpy arrays and HDF5 files from VCF (variant call format)☆31Updated 7 years ago
- Hominid: host-microbiome interaction identification☆16Updated 5 months ago
- The MG-RAST pipeline☆24Updated last year
- Efficient handling of FASTQ files from Python☆50Updated 2 months ago
- RNA-Skim: a rapid method for RNA-Seq quantification at transcript level☆19Updated 7 years ago
- Genome Annotation for the Masses☆36Updated 7 years ago
- A fast Python library for VCF files leveraging Cython for speed.☆52Updated 6 years ago
- Standalone C library for assembling Illumina short reads in small regions☆72Updated last year
- SVG based genome viewer written in javascript using D3☆33Updated 9 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 5 years ago