Alternatives and similar repositories for uBiome:

Users that are interested in uBiome are comparing it to the libraries listed below

• ubiome-opensource / microbiome-tools
  For tool creators to share their inventions that analyze, visualize, and make meaning of microbiome data.
  ☆66Updated 8 years ago
• ubiome-opensource / microbiome-data
  For anyone who wants to share and compare their microbiome data.
  ☆29Updated 8 years ago
• homologus / Pandoras-Toolbox-for-Bioinformatics
  A collection of well-known bioinformatics programs.
  ☆25Updated 9 years ago
• bioboxes / rfc
  Request for comments on interchangeable bioinformatics containers
  ☆40Updated 5 years ago
• arq5x / cyvcf
  A fast Python library for VCF files leveraging Cython for speed.
  ☆52Updated 6 years ago
• lindenb / verticalize
  Simple tool to verticalize text delimited files.
  ☆36Updated 10 months ago
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 5 years ago
• mateidavid / nanocall
  An Oxford Nanopore Basecaller
  ☆71Updated 3 years ago
• tiagoantao / pygenomics
  A library for next generation genomics in Python 3
  ☆18Updated 6 years ago
• AlexanderDilthey / MHC-PRG
  Population Reference Graphs for the HLA and MHC.
  ☆34Updated 6 years ago
• phenopolis / phenopolis
  An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data
  ☆33Updated 2 years ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• superbobry / snpy
  A wrapper-library for reading openSNP data
  ☆50Updated 6 years ago
• lh3 / bioseq-js
  For live demo, see http://lh3lh3.users.sourceforge.net/bioseq.shtml
  ☆38Updated 5 years ago
• KHP-Informatics / ngseasy
  Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)
  ☆87Updated 7 years ago
• zzj / RNASkim
  RNA-Skim: a rapid method for RNA-Seq quantification at transcript level
  ☆19Updated 7 years ago
• nellore / rail
  Scalable RNA-seq analysis
  ☆73Updated 4 years ago
• MG-RAST / pipeline
  The MG-RAST pipeline
  ☆24Updated 2 years ago
• arq5x / ggd
  ☆43Updated 8 years ago
• percyfal / snakemakelib
  Snakemake library for bioinformatics programs, with a focus on next-generation sequencing
  ☆22Updated 9 years ago
• NCBI-Hackathons / SPeW
  Automatic Packaging and Distribution of Bioinformatics Pipelines
  ☆26Updated 7 years ago
• wurmlab / oswitch
  Provides access to complex Bioinformatics software (even BioLinux!) in just one command.
  ☆76Updated 7 years ago
• karel-brinda / smbl
  SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.
  ☆23Updated 7 years ago
• johandahlberg / awesome-10x-genomics
  List of tools and resources related to the 10x Genomics GEMCode/Chromium system
  ☆84Updated 6 years ago
• evoldoers / wtfgenes
  What's The Function of these genes?
  ☆22Updated 7 years ago
• opencb / hpg-pore
  Nanopore desc
  ☆18Updated 8 years ago
• StanfordBioinformatics / loom
  A tool for running bioinformatics workflows locally or in the cloud.
  ☆30Updated 5 years ago
• Sage-Bionetworks-Challenges / SMC-RNA-Challenge
  ☆9Updated 7 years ago
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 5 years ago
• apierleoni / BioGraPy
  Biological Graphic tool in Python
  ☆34Updated 4 years ago