turpinandrew / shuffLinks
Static Huffman coding
☆10Updated 8 years ago
Alternatives and similar repositories for shuff
Users that are interested in shuff are comparing it to the libraries listed below
Sorting:
- Bit packed vector of integral values☆28Updated last year
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Updated 3 years ago
- Go implementation of ntHash☆20Updated 4 years ago
- compressed, queryable variation graphs☆11Updated 10 years ago
- Compact Data Structures Library☆129Updated 11 years ago
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆88Updated 2 years ago
- An alignment-free, reference-free and incremental data structure for colored de Bruijn graph with application to pan-genome indexing.☆44Updated 4 years ago
- Compact Data Structures Library☆103Updated 3 years ago
- An efficient external-memory algorithm for the construction of minimal perfect hash functions☆66Updated last year
- Dynamic succinct/compressed data structures☆114Updated last month
- 📖 🧬 SSHash is a compressed, associative, exact, and weighted dictionary for k-mers.☆93Updated this week
- Extremely fast inplace radix sort☆43Updated 6 years ago
- Mantis: A Fast, Small, and Exact Large-Scale Sequence-Search Index☆85Updated last year
- BITS: Binary Interval Search☆25Updated 8 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Updated 5 years ago
- Highly optimized implementation of tiered vectors, a data structure for maintaining a sequence of n elements supporting access in time O(…☆50Updated last year
- Run-length compressed BWT with LZ77 sampled suffix array☆10Updated 3 years ago
- Burrows-Wheeler Transform and FM-index in golang☆20Updated 2 years ago
- ☆20Updated 5 years ago
- memory mapped multimap, multiset, and implicit interval tree based on an in-place parallel sort☆27Updated 5 years ago
- Succinct Data Structure Library 3.0☆101Updated last month
- Space-Efficient, High-Performance Rank & Select Structures on Uncompressed Bit Sequences☆55Updated 2 years ago
- Wavelet tree based on a fixed block boosting technique☆16Updated 4 years ago
- Succinct Data Structures for Rust☆59Updated 7 months ago
- Relative data structures based on the BWT☆12Updated 7 years ago
- Succinct Data Structure Library☆109Updated 12 years ago
- C++ Implementations of sketch data structures with SIMD Parallelism, including Python bindings☆158Updated last year
- Implementation of the data structures described in the paper "Fast Compressed Tries using Path Decomposition".☆57Updated 3 years ago
- The dream accurate approximate set cardinality estimator based on 3-bit HyperLogLog. More accurate than Redis HyperLogLog.☆55Updated 4 years ago
- A fast implementation for varbyte 32bit/64bit integer compression☆121Updated 8 years ago