turpinandrew / shuff
Static Huffman coding
☆10Updated 7 years ago
Alternatives and similar repositories for shuff:
Users that are interested in shuff are comparing it to the libraries listed below
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Updated 2 years ago
- Bit packed vector of integral values☆27Updated last month
- Run-length compressed BWT with LZ77 sampled suffix array☆10Updated 2 years ago
- Relative data structures based on the BWT☆12Updated 6 years ago
- Universe-sliced indexes in C++.☆18Updated 2 years ago
- Hail: extract lines from a file, a la `head -n x | tail -n y`☆9Updated 4 years ago
- compressed, queryable variation graphs☆11Updated 9 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Updated 4 years ago
- Space-Efficient, High-Performance Rank & Select Structures on Uncompressed Bit Sequences☆15Updated 6 years ago
- Space-Efficient, High-Performance Rank & Select Structures on Uncompressed Bit Sequences☆54Updated last year
- ☆12Updated last year
- Fast and cache-efficient full-text pangenome index☆27Updated last week
- Go implementation of ntHash☆20Updated 3 years ago
- FM-index representation of a de Bruijn graph☆27Updated 7 years ago
- A fast and memory efficient hashmap using sorting to resolve collisions☆43Updated 4 years ago
- Suite of universal indexes for Highly Repetitive Document Collections☆20Updated 4 years ago
- Burrows-Wheeler Transform and FM-index in golang☆20Updated last year
- A SIMD-based C++ library providing rank/select queries over mutable bitmaps.☆35Updated 2 years ago
- Wavelet tree based on a fixed block boosting technique☆16Updated 3 years ago
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.