A cheatsheet for most common Stringology tasks
☆14Apr 14, 2021Updated 5 years ago
Alternatives and similar repositories for stringsheet
Users that are interested in stringsheet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Paper Collection for Stringologists☆17Mar 29, 2026Updated last month
- vector illustrations of BWT based searching on small strings☆16Apr 29, 2019Updated 7 years ago
- Implementation of eBWT using Prefix-free parse (PFP)☆14Jul 14, 2025Updated 10 months ago
- Pan-genome Seed Index☆20Mar 12, 2025Updated last year
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.☆14May 11, 2018Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- String Visualizer☆12Dec 18, 2025Updated 5 months ago
- Implementation of the sacabench framework☆19May 15, 2021Updated 5 years ago
- Run-length compressed BWT with LZ77 sampled suffix array☆10Apr 25, 2022Updated 4 years ago
- nimble aligner that will map your reads to the references on a laptop☆11Jun 29, 2017Updated 8 years ago
- ☆24Apr 2, 2021Updated 5 years ago
- Optimal suffix sorting and LCP array construction for constant alphabets [IPL 2017]☆10Aug 17, 2018Updated 7 years ago
- TU DOrtmund lossless COMPression framework☆19Sep 7, 2024Updated last year
- gsufsort: building suffix arrays, LCP-arrays and BWTs for string collections [AMB 2020]☆26Feb 16, 2025Updated last year
- A tool for merging large BWTs☆24Nov 26, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A space-efficient compressor based on the Re-Pair grammar☆10Apr 6, 2017Updated 9 years ago
- Collection of Suffix Array Construction Algorithms (SACAs)☆34Mar 29, 2019Updated 7 years ago
- Wavelet tree based on a fixed block boosting technique☆16May 18, 2021Updated 5 years ago
- Alignment algorithm for short Illumina reads to a de Bruijn graph☆17Jun 4, 2019Updated 6 years ago
- Static Huffman coding☆10Apr 3, 2017Updated 9 years ago
- A tool for visualizing the internal structures of morphological analyzer Sudachi☆18Jun 9, 2022Updated 3 years ago
- A Rust implementation of the Quad Wavelet Tree☆52Apr 27, 2026Updated 3 weeks ago
- ProphAsm – a rapid computation of simplitigs directly from k-mer sets☆25Feb 17, 2023Updated 3 years ago
- A C++ library implementing fast language models estimation using the 1-Sort algorithm.☆16May 18, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Extracts subgraphs or components from a graph in GFA format☆24Nov 18, 2024Updated last year
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- R-Index-F Library for Pattern Matching☆12Aug 8, 2024Updated last year
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Apr 25, 2022Updated 4 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Mar 18, 2020Updated 6 years ago
- Inducing enhanced suffix arrays for string collections [DCC'16, TCS 2017]☆27Dec 2, 2025Updated 5 months ago
- SUPBUB is a tool that, in linear time, finds out superbubbles(special graph-structures) in a directed graph.☆12Sep 19, 2019Updated 6 years ago
- BagMinHash - Minwise Hashing Algorithm for Weighted Sets☆26Aug 26, 2020Updated 5 years ago
- Fast, Cache-Efficient, and Scalable Queries on Pangenomes☆41Mar 9, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ⚙️🛠️ Essential C++ utilities.