koeppl / stringsheetLinks
A cheatsheet for most common Stringology tasks
☆15Updated 4 years ago
Alternatives and similar repositories for stringsheet
Users that are interested in stringsheet are comparing it to the libraries listed below
Sorting:
- Paper Collection for Stringologists☆17Updated last month
- Wavelet tree based on a fixed block boosting technique☆16Updated 4 years ago
- R-Index-F Library for Pattern Matching☆13Updated 9 months ago
- An optimal space run-length Burrows-Wheeler transform full-text index☆65Updated 2 years ago
- vector illustrations of BWT based searching on small strings☆16Updated 6 years ago
- Implementation of eBWT using Prefix-free parse (PFP)☆14Updated 9 months ago
- Inducing enhanced suffix arrays for string collections [DCC'16, TCS 2017]☆27Updated 2 years ago
- A tool for merging large BWTs☆26Updated 4 years ago
- Efficient construction of the BWT using string compression☆18Updated this week
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.☆15Updated 7 years ago
- Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays☆13Updated 2 weeks ago
- Implementation of a Backpack Quotient Filter☆12Updated 10 months ago
- Fast and cache-efficient full-text pangenome index☆29Updated last week
- Ultra fast MSD radix sorter☆11Updated 4 years ago
- Implementation of the sacabench framework☆17Updated 4 years ago
- TU DOrtmund lossless COMPression framework☆19Updated 8 months ago
- gsufsort: building suffix arrays, LCP-arrays and BWTs for string collections [AMB 2020]☆27Updated 3 months ago
- A space-efficient compressor based on the Re-Pair grammar☆11Updated 8 years ago
- A lightweight suffix-sorting library enhanced with LCP construction☆11Updated 5 years ago
- modified from gitlab.com/manzai/Big-BWT to support fasta files☆9Updated 4 months ago
- Relative data structures based on the BWT☆12Updated 7 years ago
- External memory suffix array construction using inducing☆11Updated 4 years ago
- Prefix Free Parsing☆8Updated last year
- Fast and compact locality-preserving minimal perfect hashing for k-mer sets.☆43Updated last year
- Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)☆47Updated last year
- A hash map using the BooPHF perfect hash function☆12Updated 8 years ago
- Compact Tree Representation☆16Updated 8 years ago
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Updated 3 years ago
- BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper☆48Updated 3 years ago
- Dynamic succinct/compressed data structures☆112Updated last year