Draw Circos in Python
☆31Sep 19, 2022Updated 3 years ago
Alternatives and similar repositories for PyCircos
Users that are interested in PyCircos are comparing it to the libraries listed below
Sorting:
- Python wrapper for Circos☆12Jan 8, 2018Updated 8 years ago
- Work supporting the comparison of SnpEff and VEP effect prediction and HGVS identifiers☆11Mar 15, 2017Updated 9 years ago
- Extremely fast Variant Call Format annotation☆11Dec 25, 2024Updated last year
- MrMosaic (Genomic Mosaic Structural Variant Caller)☆15Jul 21, 2017Updated 8 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Mar 25, 2022Updated 3 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Jan 28, 2026Updated last month
- Somatic point mutation caller☆17Jul 8, 2016Updated 9 years ago
- elPrep reimplementations in C++ and Java, only for benchmark comparisons☆10Feb 13, 2023Updated 3 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Aug 18, 2020Updated 5 years ago
- Fork of https://bitbucket.org/mcgranahanlab/lohhla☆18Feb 19, 2020Updated 6 years ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Mar 10, 2018Updated 8 years ago
- Bacterial genomes finishing tool for structural insights on draft genomes☆23Sep 22, 2023Updated 2 years ago
- Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics.☆22Feb 10, 2019Updated 7 years ago
- A local realigner around InDels for MethylSeq data☆12Apr 28, 2016Updated 9 years ago
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- Standard tools and protocols for MiSeq amplicon sequencing of 16S rRNA genes☆10Nov 14, 2022Updated 3 years ago
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Oct 5, 2019Updated 6 years ago
- Profiler for metagenomics based on NGLess☆13Feb 22, 2024Updated 2 years ago
- Repo for downloading and storing OMIM data☆19Oct 6, 2016Updated 9 years ago
- Open-source opinionated Galaxy-based framework for microbiota analysis☆14Jan 21, 2021Updated 5 years ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆13Dec 26, 2022Updated 3 years ago
- efficient alignment of strings to partially ordered string graphs☆33Jan 31, 2022Updated 4 years ago
- Extremely fast BAM depth calculation for WGS, exome, or targeted sequencing☆13Jan 25, 2019Updated 7 years ago
- Short reads aligner for NIPT/CNV☆16Oct 10, 2018Updated 7 years ago
- A QIIME 2 implementation of SMURF☆13Apr 27, 2022Updated 3 years ago
- ☆18Nov 19, 2022Updated 3 years ago
- principal components population genetics analysis on linux☆21Aug 29, 2021Updated 4 years ago
- SEEKIN: SEquence-based Estimation of KINship☆14Oct 11, 2017Updated 8 years ago
- Code to reproduce "Detecting liver cancer using cell-free DNA fragmentomes☆11Nov 18, 2022Updated 3 years ago
- Classifier for metagenomic sequences☆30Nov 12, 2018Updated 7 years ago
- A microbial profiling framework for metagenomic analysis☆24Apr 9, 2020Updated 5 years ago
- The Modular Aligner and The Modular SV Caller☆46Jul 18, 2023Updated 2 years ago
- A GPU-accelerated method for ultrarapid pathogen identification from metagenomic sequences.☆29Jun 4, 2024Updated last year
- CNV Rapid Aberration Detection And Reporting☆12Mar 2, 2021Updated 5 years ago
- The integrated pipeline for Indel detection☆17Apr 29, 2018Updated 7 years ago
- Generic hash table library in C☆41Jan 2, 2026Updated 2 months ago
- gap opening realigner for BAM data streams☆18Oct 17, 2012Updated 13 years ago
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆13Oct 7, 2025Updated 5 months ago
- Probabilistic HLA typing☆35Aug 31, 2019Updated 6 years ago