tsznxx / PyCircosLinks
Draw Circos in Python
☆31Updated 3 years ago
Alternatives and similar repositories for PyCircos
Users that are interested in PyCircos are comparing it to the libraries listed below
Sorting:
- A software for calculating telomere length☆73Updated 7 years ago
- fastx-utils using klib☆20Updated 5 years ago
- Tools for processing and analyzing structural variants.☆34Updated 10 years ago
- R package for inferring copy number from read depth☆32Updated 3 years ago
- Simple code snippets and data for the One Flowcell - One Assembly study☆35Updated 8 years ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- Comprehensive benchmark of structural variant callers☆48Updated 4 years ago
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆70Updated 2 years ago
- ☆54Updated 3 years ago
- Scripts involved in our workflow for detecting CNVs from WGS data using read depth-based methods☆46Updated 3 years ago
- ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama…☆21Updated 3 years ago
- for visual evaluation of read support for structural variation☆55Updated last year
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆23Updated 2 months ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 8 months ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 10 years ago
- A tutorial on structural variant calling for short read sequencing data☆39Updated last year
- ☆89Updated 5 years ago
- QDNAseq package for Bioconductor☆54Updated last year
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 10 months ago
- A simplified pipeline for ctDNA sequencing data analysis☆37Updated 8 years ago
- Powerful statistics for VCF files☆73Updated 2 months ago
- A bioinformatics tool for SV detection and virus integration discovery☆21Updated 8 years ago
- microRNA PREdiction From small RNA-seq data☆31Updated 8 years ago
- parallelized blat with multi-threads support☆55Updated last year
- Linkage disequlibrium-informed PGT-A (LD-PGTA). A package for detecting genotypic signatures of aneuploidy from extremely low-coverage se…☆18Updated 3 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Updated 4 years ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆36Updated 2 years ago
- Scripts to run copynumber variation calls on tumor and normal BAM files using Varscan2☆30Updated 7 years ago
- A collection of command line tools for working with sequencing data☆52Updated last month