WISECONDOR (WIthin-SamplE COpy Number aberration DetectOR): Detect fetal trisomies and smaller CNV's in a maternal plasma sample using whole-genome data.
☆46Apr 24, 2024Updated 2 years ago
Alternatives and similar repositories for wisecondor
Users that are interested in wisecondor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- WisecondorX — An evolved WISECONDOR☆118Oct 20, 2026Updated last week
- ThermoFisher Ion Torrent plugin to detect fetal trisomies and estimate fetal fraction☆17Mar 23, 2018Updated 8 years ago
- SANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genom…☆14Jun 5, 2020Updated 6 years ago
- NiPTUNE. A Python library for NIPT analyses.☆11Nov 22, 2021Updated 4 years ago
- R Package for Non Invasive Prenatal Testing (NIPT) analysis☆46Nov 5, 2019Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Short reads aligner for NIPT/CNV☆16Oct 10, 2018Updated 8 years ago
- do some exercise☆15Dec 2, 2025Updated 11 months ago
- PREFACE -- PREdict FetAl ComponEnt☆16Updated this week
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆31Feb 20, 2021Updated 5 years ago
- Linkage disequlibrium-informed PGT-A (LD-PGTA). A package for detecting genotypic signatures of aneuploidy from extremely low-coverage se…☆19Oct 10, 2022Updated 4 years ago
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- (No maintenance) Detect gene fusion directly from raw fastq files☆25Aug 13, 2017Updated 9 years ago
- Pathogenicity prediction and prioritization of genetic variants.☆20Sep 21, 2026Updated last month
- High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants☆22Mar 27, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆23Feb 20, 2026Updated 8 months ago
- A new tool to infer sex from massively parallel sequencing data.☆17May 16, 2025Updated last year
- A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data☆13Oct 26, 2026Updated last week
- Microsatellite Analysis for Normal-Tumor InStability☆79Jul 14, 2022Updated 4 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 4 years ago
- BIC@MSKCC Variants Pipeline☆23Mar 28, 2023Updated 3 years ago
- Variant Interpretation Pipeline☆52Updated this week
- 用每个窗口的read数作为特征、胎儿浓度作为标签，训练神经网络模型；训练完成的神经网络模型可用于NIPT胎儿浓度的预测☆11Jun 10, 2022Updated 4 years ago
- A nextflow pipeline for calling CNVs in probe-enriched sequencing workflows☆14Oct 20, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- NGS DNA best practice pipeline for Illumina sequencing - alignment, variant calling, annotation and QC☆18Aug 22, 2025Updated last year
- ☆14Dec 13, 2023Updated 2 years ago
- Generate an enhanced VCF files from ClinVar XML Full releases☆18Jul 21, 2026Updated 3 months ago
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 6 years ago
- ☆13Dec 7, 2021Updated 4 years ago
- MrMosaic (Genomic Mosaic Structural Variant Caller)☆15Jul 21, 2017Updated 9 years ago
- Collection of notes and scripts related to NGS☆14Sep 2, 2026Updated 2 months ago
- Reference data: BED files, genes, transcripts, variations.☆90Nov 28, 2017Updated 8 years ago
- cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data☆82Aug 18, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- NIPT-human-genetics is a semi-automated workflow designed for the analysis of large-scale ultra-low-pass non-invasive prenatal test (NIPT…☆15May 30, 2026Updated 5 months ago
- CNV screening and annotation tool☆25Oct 31, 2016Updated 10 years ago
- Browser-based tool for visualizing and analyzing germline copy number variants in genomic data☆12Nov 7, 2024Updated last year
- A Mendelian approach to variant effect prediction built in keras☆22Aug 22, 2026Updated 2 months ago
- ☆18Jul 13, 2021Updated 5 years ago
- cfDNA cell type of origin estimation☆36Oct 19, 2023Updated 3 years ago
- Official code repository for JAX-CNV☆14Jan 16, 2020Updated 6 years ago