timplab / Cas9EnrichmentView external linksLinks
scripts for analysis associated with Cas9Enrichment publication
☆12Feb 10, 2020Updated 6 years ago
Alternatives and similar repositories for Cas9Enrichment
Users that are interested in Cas9Enrichment are comparing it to the libraries listed below
Sorting:
- Datastores for reads, not your papa's FASTQ files.☆11Jul 28, 2023Updated 2 years ago
- CNV calling algorithm for detection of homozygous and hemizygous deletions from whole exome sequencing data☆12Nov 9, 2025Updated 3 months ago
- DEPRECATED Interfaces to common external biological tools from julia scripts and programs☆14Oct 8, 2024Updated last year
- singleCellNet in Python☆15Jan 29, 2026Updated 2 weeks ago
- ☆30Feb 5, 2021Updated 5 years ago
- B-cell repertoire and clonal family tree explorer☆17Updated this week
- Practical Bayesian Inference☆16Aug 7, 2018Updated 7 years ago
- Peak calling for 4C data☆13May 4, 2018Updated 7 years ago
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Nov 10, 2025Updated 3 months ago
- Entropy, Mutual Information, KL-Divergence related to Shannon's information theory and functions to binarize data☆22Aug 17, 2017Updated 8 years ago
- The Zika bioinformatics pipeline☆36Mar 29, 2020Updated 5 years ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆20Nov 18, 2022Updated 3 years ago
- A tool to detect structural variant☆17Mar 27, 2023Updated 2 years ago
- ☆11Jul 3, 2022Updated 3 years ago
- Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing☆21Feb 3, 2023Updated 3 years ago
- methods for orphan gene prediction paper optimization☆25Dec 24, 2021Updated 4 years ago
- Parse and process SAM and BAM formatted files☆29Apr 26, 2025Updated 9 months ago
- A julia wrapper for Leiden algorithm to discover and plot the communities of a network.☆10Jun 10, 2021Updated 4 years ago
- Just Another JAva Package for Sequence Analysis☆24Dec 2, 2022Updated 3 years ago
- NANOME pipeline (Nanopore long-read sequencing consensus DNA methylation detection method and pipeline)☆34Dec 5, 2025Updated 2 months ago
- ☆35Mar 2, 2021Updated 4 years ago
- ☆10May 31, 2022Updated 3 years ago
- Cell Heterogeneity Accounted cLonal Methylation (CHALM)☆10Jul 6, 2021Updated 4 years ago
- A single-cell transcriptomic analysis of endometriosis, endometriomas, eutopic endometrial samples and uninvolved ovary tissues highlight…☆17Jan 12, 2023Updated 3 years ago
- Material for the DataLucence:Images course☆10Jun 14, 2017Updated 8 years ago
- ☆10Aug 29, 2023Updated 2 years ago
- mesa package for Methylation Enrichment Sequencing Analysis☆15Nov 20, 2025Updated 2 months ago
- Phylogenetic tree library for JavaScript/Node.js☆37Nov 16, 2022Updated 3 years ago
- A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.☆36Mar 13, 2022Updated 3 years ago
- Demo code running on ESP32 micro, showing FreeRTOS concepts + MQTT + LED Strip + Accelerometer☆10Feb 7, 2017Updated 9 years ago
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- Modular Genome Assembly, Annotation and Assessment Pipeline☆20Updated this week
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- New version of mpMap☆12Jul 19, 2020Updated 5 years ago
- Scotch pipeline for indel calling.☆10Nov 25, 2019Updated 6 years ago
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆11Aug 2, 2023Updated 2 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Sep 25, 2019Updated 6 years ago
- ☆11Mar 15, 2025Updated 11 months ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago