tavareshugo / data-carpentry-rnaseq
☆22Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for data-carpentry-rnaseq
- My youtube programming scripts☆38Updated last month
- From RNA-seq raw reads to enriched pathways by DEGs☆31Updated 6 months ago
- An R interface to the MEME Suite☆46Updated last month
- GREAT Analysis - Functional Enrichment on Genomic Regions☆85Updated 3 months ago
- Summer school course materials collection☆25Updated 6 years ago
- Estimation of Promoter Activity from RNA-Seq data☆49Updated 2 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆49Updated 3 months ago
- Identify and correct invalid gene symbols☆55Updated this week
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 5 years ago
- 🧬 Gene analysis toolkit based on R☆53Updated 2 months ago
- Website for the precision medicine workshop☆43Updated this week
- This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…☆28Updated 6 months ago
- workshop website on readthedocs☆19Updated last week
- Workshop • Analysis of RNA-seq data☆34Updated 8 months ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆29Updated 11 months ago
- documentation for trackViewer☆29Updated 5 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆61Updated last year
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆35Updated 6 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆26Updated 3 months ago
- ☆26Updated last year
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 5 years ago
- Filtering of PDX samples for mouse derived reads☆27Updated last year
- Integrative pathway enrichment analysis of multivariate omics data☆101Updated 3 months ago
- Detecting intron retention from RNA-Seq experiments☆53Updated 4 months ago
- binned motif enrichment analysis and visualisation☆38Updated 3 weeks ago
- Time-Course Multi-Omics data integration☆24Updated 7 months ago
- Repository for resources we'd like to share with the community.☆24Updated 2 years ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 5 years ago
- Flexible Bayesian inference of mutational signatures☆33Updated last year
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆50Updated 3 years ago