☆22Jan 28, 2021Updated 5 years ago
Alternatives and similar repositories for data-carpentry-rnaseq
Users that are interested in data-carpentry-rnaseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Write PubMed search results with two display options (citation or listview) to PDF or Word☆13Oct 18, 2020Updated 5 years ago
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆14Jan 14, 2018Updated 8 years ago
- Pipeline for generating RNAseq-based cancer patient reports☆15Aug 24, 2026Updated 2 weeks ago
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆14May 16, 2026Updated 3 months ago
- Open-source plugins of Hiplot (ORG) visualization platform.☆21May 4, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Tutorial on survival modeling with omics data☆12May 6, 2026Updated 4 months ago
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- Python module for genetic analyses☆19Mar 14, 2026Updated 5 months ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆19Dec 28, 2022Updated 3 years ago
- heatmap3 is an improved heatmap package. It is completely compatible with the original R function heatmap, and provides some more powerfu…☆11Sep 2, 2021Updated 5 years ago
- ☆15Jun 11, 2018Updated 8 years ago
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆12May 19, 2019Updated 7 years ago
- RNA-seq analysis scripts☆18Jan 8, 2026Updated 7 months ago
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- CRT outreach program to assist life scientists in learning basic data science skills.☆29Feb 11, 2021Updated 5 years ago
- A set of workflows written in Nextflow for Genome Annotation.☆46Jan 28, 2026Updated 7 months ago
- CWGCNA is an R package to perform causal inference from the WGCNA framework.☆20Oct 26, 2024Updated last year
- A Python library to visualize and analyze long-read transcriptomes☆69Jan 19, 2026Updated 7 months ago
- archived: Data Science for Agriculture in R; has been succeeded by https://schmidtpaul.github.io/dsfair_quarto/☆15Feb 12, 2026Updated 6 months ago
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 4 years ago
- Source code of the Bgee pipeline used to build the Bgee database☆12Updated this week
- A single package (command line tool and library) in Java to validate, simulate, translate and analyse NeuroML 2 models☆13May 19, 2026Updated 3 months ago
- ☆20Sep 29, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆21May 24, 2021Updated 5 years ago
- A variant caller for the GBA gene using WGS data☆23Jul 31, 2024Updated 2 years ago
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago
- Web-site for the 2020 CRUK CC Bioinformatics Summer School (Held virtually)☆25Mar 4, 2021Updated 5 years ago
- ☆12Jan 14, 2023Updated 3 years ago
- A Carpentries-style lesson on RNA-Sequencing☆21May 1, 2023Updated 3 years ago
- ☆11Mar 16, 2022Updated 4 years ago
- ☆10Jan 21, 2023Updated 3 years ago
- ☆15May 3, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- An efficient tool for large-scale correlation network analysis☆15Dec 27, 2024Updated last year
- Single-cell identity definition using random forest modelling and recursive feature elimination☆12Aug 15, 2020Updated 6 years ago
- Suite of tools to conduct methylation data analysis. Methods from this workspace can be used for alignment and quality control analysis f…☆21Nov 19, 2020Updated 5 years ago
- Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México☆25Oct 29, 2025Updated 10 months ago
- ☆14Feb 17, 2022Updated 4 years ago
- Build SVG Custom User Interface in R, rmd, qmd and Shiny☆20Aug 23, 2026Updated 2 weeks ago
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆23Feb 20, 2026Updated 6 months ago