cpicpgx / cpic-dataLinks
CPIC Data definitions and code to use that data
☆31Updated last week
Alternatives and similar repositories for cpic-data
Users that are interested in cpic-data are comparing it to the libraries listed below
Sorting:
- Calling star alleles in highly polymorphic pharmacogenes (e.g. CYP450 genes) by leveraging genome graph-based variant detection.☆34Updated 3 months ago
- The Pharmacogenomic Clinical Annotation Tool☆145Updated this week
- Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes☆64Updated 3 weeks ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆49Updated this week
- Extensible specification for representing and uniquely identifying biological sequence variation☆93Updated last month
- A Python package for pharmacogenomics (PGx) research☆76Updated 6 months ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆85Updated 3 months ago
- Workflows for converting between sequence data formats☆38Updated 3 years ago
- Annotation of VCF variants with functional impact and from databases (executable+library)☆62Updated 2 weeks ago
- Mutation Identification Pipeline. Read the latest documentation:☆45Updated last year
- Imputation Server 2 workflow to facilitate genotype imputation at scale.☆28Updated last week
- Pandas-based Data Handler for VCF, BED, and SAM Files☆32Updated 3 years ago
- phenotype-based prioritization of candidate genes for human diseases☆65Updated 2 years ago
- A phenotype-based tool for variant prioritization in WES and WGS data☆38Updated 2 years ago
- TIDDIT - structural variant calling☆76Updated 4 months ago
- Natural Language Search and Analysis of High Dimensional Genomic Data☆48Updated 3 weeks ago
- a Medical Genetics Sequence Analysis Pipeline☆84Updated this week
- ☆82Updated 6 years ago
- R Package for Non Invasive Prenatal Testing (NIPT) analysis☆41Updated 5 years ago
- Generic human DNA variant annotation pipeline☆58Updated last year
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆72Updated 5 months ago
- Website to analyze conflicting assertions in ClinVar☆18Updated last year
- PGxPOP☆17Updated 2 years ago
- LIkelihood Ratio Interpretation of Clinical AbnormaLities☆29Updated 2 months ago
- Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data☆87Updated 2 months ago
- SeqMonk NGS visualisation and analysis tool☆49Updated 2 months ago
- A Mendelian approach to variant effect prediction built in keras☆19Updated 10 months ago
- A modular annotation tool for genomic variants☆127Updated last week
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- Tissue-specific variant effect predictions on splicing☆42Updated 2 years ago