cpicpgx / cpic-dataLinks
CPIC Data definitions and code to use that data
☆30Updated last week
Alternatives and similar repositories for cpic-data
Users that are interested in cpic-data are comparing it to the libraries listed below
Sorting:
- Calling star alleles in highly polymorphic pharmacogenes (e.g. CYP450 genes) by leveraging genome graph-based variant detection.☆34Updated last week
- Extensible specification for representing and uniquely identifying biological sequence variation☆88Updated 2 months ago
- The Pharmacogenomic Clinical Annotation Tool☆135Updated 3 weeks ago
- Annotation of VCF variants with functional impact and from databases (executable+library)☆59Updated this week
- A Python package for pharmacogenomics (PGx) research☆73Updated 3 months ago
- GA4GH Variation Representation Python Implementation☆56Updated last month
- ☆23Updated 6 years ago
- Mutation Identification Pipeline. Read the latest documentation:☆44Updated last year
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- Multi-sample somatic variant caller☆50Updated 3 years ago
- mtDNA Variant Caller☆34Updated 5 months ago
- A Nextflow Genome-Wide Association Study (GWAS) Pipeline☆35Updated 4 months ago
- Workflows for converting between sequence data formats☆38Updated 3 years ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆67Updated 2 months ago
- An information model for representing variant annotations.☆18Updated last week
- Backend server for Genome Nexus☆41Updated last month
- Public repository for VariantValidator project☆75Updated 2 weeks ago
- Characterization of Germline variants☆98Updated 3 years ago
- A tool to genotype CYP2D6 with WGS data☆53Updated last year
- TIDDIT - structural variant calling☆73Updated last month
- Transcript versions for HGVS libraries☆31Updated last week
- Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes☆62Updated last month
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆29Updated 2 weeks ago
- (WIP) best-practices workflow for rare disease☆60Updated 11 months ago
- phenotype-based prioritization of candidate genes for human diseases☆65Updated 2 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆47Updated this week
- This repository contains Jupyter Notebooks containing GATK Best Practices Workflows☆26Updated 5 years ago
- Variant catalogue pipeline☆25Updated last month
- Tools for querying and analysis of genomic data☆27Updated 6 months ago
- Generic human DNA variant annotation pipeline☆58Updated last year