ScienceParkStudyGroup / rna-seq-lessonLinks
A Carpentries-style lesson on RNA-Sequencing
☆19Updated 2 years ago
Alternatives and similar repositories for rna-seq-lesson
Users that are interested in rna-seq-lesson are comparing it to the libraries listed below
Sorting:
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- ☆23Updated last month
- Genomic data interpretation and visualization Workshop☆21Updated 2 months ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- Representation and manipulation of genomic intervals☆46Updated 2 months ago
- Differential expression and allelic analysis, nonparametric statistics☆30Updated last year
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- Transcript quantification import with automatic metadata detection☆67Updated 2 weeks ago
- ☆26Updated 2 years ago
- A pipeline for differential expression and differential alternative splicing analysis☆67Updated last year
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆16Updated 3 weeks ago
- ☆29Updated last year
- Isoform-level functional RNA-Seq analysis 🧬☆36Updated 2 months ago
- ☆18Updated 2 years ago
- This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…☆28Updated last year
- R package wrapping bedtools☆44Updated 10 months ago
- An R interface to the MEME Suite☆54Updated last month
- A tidyverse and grammar of graphics powered line traces visualizer☆30Updated 5 months ago
- Flexible Bayesian inference of mutational signatures☆41Updated 3 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- Workshop • Analysis of RNA-seq data☆37Updated last year
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- 𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of …☆68Updated 2 weeks ago
- workshop website on readthedocs☆21Updated 4 months ago
- UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets☆34Updated 10 months ago
- A tidy interface for coverage analysis☆31Updated 5 years ago
- interactive plots for differential expression analysis☆34Updated 7 months ago