etirouthier / keras_dnaLinks
☆24Updated 4 years ago
Alternatives and similar repositories for keras_dna
Users that are interested in keras_dna are comparing it to the libraries listed below
Sorting:
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- ☆34Updated 2 years ago
- ☆39Updated 2 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆31Updated last year
- Tissue-specific variant effect predictions on splicing☆42Updated 2 years ago
- Python package to analyze DNA methylation data☆43Updated 10 months ago
- Saluki, a method to predict mRNA half-lives from sequence☆25Updated 2 years ago
- Computational framework to identify promoter sequences from RNA-seq datasets☆10Updated last year
- Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Droso…☆67Updated 2 years ago
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Updated 4 years ago
- off-targeting assessment of Cas9 gRNAs☆13Updated 4 years ago
- Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"☆45Updated last year
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆54Updated 6 months ago
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆36Updated 7 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆18Updated last month
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Updated 3 weeks ago
- ☆24Updated last year
- A library for counting small kmer frequencies in nucleotide sequences.☆28Updated 10 months ago
- Analysis pipeline for the GUIDE-seq assay.☆27Updated last month
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆28Updated last month
- 🏺 Exploring novel tumor epitope identification☆36Updated 4 years ago
- Interactive tutorials for using scikit-bio in biological research☆26Updated last month
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆51Updated 6 years ago
- ☆35Updated 2 years ago
- iCount, protein-RNA interaction analytics☆23Updated 3 years ago
- A continually expanding collection of RNA-seq tools☆51Updated 11 months ago
- Gene Fusion Visualiser☆51Updated 2 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆85Updated 3 months ago
- Interactive multiscale visualization for structural variation in human genomes☆70Updated 2 weeks ago