etirouthier / keras_dnaLinks
☆23Updated 4 years ago
Alternatives and similar repositories for keras_dna
Users that are interested in keras_dna are comparing it to the libraries listed below
Sorting:
- Tool package to perform in-silico CRISPR analysis and assessment☆28Updated last year
- Tissue-specific variant effect predictions on splicing☆42Updated 2 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated last year
- ☆39Updated 9 months ago
- A python library for creating simulated regulatory DNA sequences☆38Updated 2 years ago
- 🏺 Exploring novel tumor epitope identification☆34Updated 4 years ago
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.☆28Updated last week
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆28Updated 2 weeks ago
- Predicting gene expression levels from genomic sequences☆53Updated 5 years ago
- Deep Feature Interaction Maps (DFIM)☆53Updated 6 years ago
- RNA modification detection using Nanopore raw reads with Deep One Class classification☆19Updated 4 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 4 months ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆50Updated 5 years ago
- Python library for processing and visualizing Hi-C data☆20Updated 5 years ago
- Pipeline to call somatic cancer neoantigens from mutations in patient tumor DNA☆12Updated 2 years ago
- A python package and a set of shell commands to handle GTF files☆48Updated last year
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆52Updated 4 months ago
- Efficient target prediction incorporating accessibility of interaction sites☆48Updated 4 months ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated last year
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆91Updated last month