riffomonas / distancesLinks
☆13Updated 4 months ago
Alternatives and similar repositories for distances
Users that are interested in distances are comparing it to the libraries listed below
Sorting:
- Species richness with high diversity☆68Updated last month
- Various functions for analysis of microbial community data☆44Updated 2 years ago
- diversity estimation under ecological networks☆83Updated last month
- Pairwise multilevel comparison using adonis☆76Updated 2 years ago
- Normalized Stochasticity Ratio in community assembly☆25Updated 7 months ago
- Look Up Guild Information for Fungi in R☆21Updated 2 months ago
- Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA☆35Updated 5 years ago
- Workshop materials for SFSU SCIP 2022.☆12Updated 3 years ago
- Various customs functions written to enhance the base functions of phyloseq. Most of them are used in the formation "Métagénomique 16S" p…☆33Updated 3 months ago
- Microbial community analysis tools in R☆21Updated 2 years ago
- JAMP - Just Another Metabarcoding Pipeline☆35Updated 3 years ago
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆15Updated 4 months ago
- TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data☆22Updated 2 years ago
- R package for downstream analysis for anacapa eDNA pipeline☆22Updated 3 years ago
- power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA☆37Updated 9 years ago
- Miscellaneous functions for metagenomic analysis.☆50Updated this week
- Repo for a Microbiome Protocol☆10Updated 7 years ago
- Informatic Sequence Classification Trees☆14Updated 2 weeks ago
- Utilities for community ecology analysis☆18Updated 4 years ago
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.☆26Updated 2 years ago
- Barcode demultiplex for Illumina I1, R1, R2 fastq.gz files☆31Updated 7 years ago
- Tools for visualising microbial community amplicon data☆67Updated last month
- creating reference databases for amplicon sequencing☆38Updated 2 months ago
- Differential abundance (DA) and correlation analyses for microbial absolute abundance data☆123Updated 2 weeks ago
- LoD calculator☆20Updated 5 years ago
- functions for analyzing phyloseq data☆27Updated 4 months ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆71Updated last year
- Linear Decomposition Model☆24Updated last year
- Speedy versions of phyloseq functions☆48Updated last year
- The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or t…☆71Updated 2 years ago