getzlab / CLUMPS-PTMLinks
CLUMPS adapted to post-translational modifications.
☆9Updated last week
Alternatives and similar repositories for CLUMPS-PTM
Users that are interested in CLUMPS-PTM are comparing it to the libraries listed below
Sorting:
- ☆17Updated last year
- ☆18Updated 3 years ago
- A shiny-based web tool for interactive analysis of DepMap data☆23Updated 4 years ago
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 2 years ago
- ☆42Updated last year
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆21Updated 2 years ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆15Updated 7 months ago
- ☆19Updated 10 months ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆28Updated last month
- Code related to the Celligner manuscript☆46Updated 4 years ago
- Molecular interactions inference from single-cell multi-omics data☆24Updated 2 weeks ago
- ☆29Updated 6 months ago
- R package for the analysis of single-cell immune repertoires☆42Updated 3 months ago
- DIABLO - an integrative multi-group, multi-dataset classification method☆23Updated 6 years ago
- ACTIONet single-cell analysis framework☆41Updated 8 months ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆31Updated 3 years ago
- ☆48Updated 2 years ago
- PECA is a software for inferring context specific gene regulatory network from paired gene expression and chromatin accessibility data☆43Updated last year
- Inference of TCR motifs☆30Updated last month
- Knowledge-primed neural networks☆37Updated 2 years ago
- Using TCR and expression for sequence embedding☆54Updated 4 months ago
- ☆40Updated 4 years ago
- ☆34Updated 2 years ago
- This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022☆23Updated 3 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆34Updated 3 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 4 months ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago
- Unified access to several second-generation deconvolution methods☆71Updated 3 weeks ago
- ☆18Updated 2 months ago
- Benchmark of GRNs using the GRETA pipeline☆24Updated 2 months ago