symbioticMe / proBatchLinks
Tools for Batch Effects Diagnostics and Correction
☆17Updated 6 months ago
Alternatives and similar repositories for proBatch
Users that are interested in proBatch are comparing it to the libraries listed below
Sorting:
- Methods for label-free mass spectrometry proteomics☆15Updated 7 months ago
- R package - MSstats☆86Updated 2 weeks ago
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆121Updated this week
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆97Updated 2 months ago
- R package for analysing proteomics data☆50Updated 2 years ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆37Updated last week
- LIMMA (an empirical Bayes method) pipeline for two group comparison in a proteomic experiment☆29Updated last year
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated 4 months ago
- Mass spectrometry imaging toolbox☆65Updated 2 weeks ago
- An R interface to enrichR☆93Updated 9 months ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆29Updated 11 months ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆62Updated 2 weeks ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆84Updated 2 years ago
- The repo for LFQ-Analyst☆30Updated last year
- Updated implementation of the GSEA-P R application for modern R distributions☆97Updated 3 years ago
- DEP package☆28Updated 3 years ago
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆39Updated 8 months ago
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 7 years ago
- ☆69Updated 7 years ago
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆21Updated 2 years ago
- Tools for manipulating annotated data matrices☆92Updated 4 years ago
- R package to access DoRothEA's regulons☆152Updated last year
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆55Updated last year
- Imputing proteomics data using deep learning models☆30Updated this week
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆36Updated 8 months ago
- netZooR is a network biology package implemented in R.☆114Updated 2 months ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆92Updated 10 months ago
- Differential Expression Analysis tool box R lang package for omics data☆46Updated 2 weeks ago
- ☆67Updated 2 years ago
- published papers with a lot of data☆74Updated 6 months ago