arnesmits / DEPLinks
DEP package
☆30Updated 3 years ago
Alternatives and similar repositories for DEP
Users that are interested in DEP are comparing it to the libraries listed below
Sorting:
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated last month
- R package for analysing proteomics data☆50Updated 2 years ago
- Methods for label-free mass spectrometry proteomics☆15Updated 10 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆65Updated last month
- An r package for proteomics data Analysis, developed from DEP.☆34Updated 10 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆69Updated last week
- Interactive Cytometry Data Analysis☆66Updated 2 months ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆81Updated 2 weeks ago
- scDataviz: single cell dataviz and downstream analyses☆66Updated 4 years ago
- Cancer Dependency Map package☆33Updated last year
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆22Updated 2 years ago
- Tools for manipulating annotated data matrices☆92Updated 4 years ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆99Updated 5 months ago
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆51Updated 5 months ago
- Documentation for the limpa Bioconductor package, which implements quantification and differential analysis of mass-spectrometry proteomi…☆20Updated this week
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆32Updated last week
- An R Package for Geneset Enrichment Workflows☆78Updated last month
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆33Updated 5 months ago
- An R interface to enrichR☆94Updated last year
- Identify and correct invalid gene symbols☆62Updated last year
- Brings SingleCellExperiment objects to the tidyverse☆37Updated 2 months ago
- A General Framework for Consensus Partitioning☆65Updated last week
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆46Updated 3 months ago
- MSigDB gene sets for multiple organisms in a tidy data format☆84Updated 6 months ago
- Content for the OSCA Book.☆64Updated 2 years ago
- A tool for large scale omics datasets evaluation☆23Updated 2 years ago
- An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.…☆112Updated this week
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆24Updated 7 months ago