Alternatives and similar repositories for DIAlignR

Users that are interested in DIAlignR are comparing it to the libraries listed below

• optimusmoose / jsms
  A modular JavaScript viewer for mass spectrometry data
  ☆12Updated 3 years ago
• MatteoLacki / opentims_bruker_bridge
  DLL and SO from Bruker.
  ☆13Updated 2 years ago
• nathaniel-mahieu / mz.unity
  mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data
  ☆14Updated 9 years ago
• MarcIsak / MSLibrarian
  MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics
  ☆14Updated 2 years ago
• zhengfj1994 / MetEx
  MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.
  ☆16Updated last year
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• MRMkit / MRMkit
  ☆9Updated last month
• vsegurar / DeepMSPeptide
  ☆17Updated 5 years ago
• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆26Updated last month
• alexandrovteam / curatr
  ☆14Updated 2 years ago
• ZhuMSLab / DecoMetDIA
  ☆11Updated 3 years ago
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆48Updated 5 months ago
• MatteoLacki / timspy
  ☆20Updated 4 years ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated last year
• verilylifesciences / deepmass
  DeepMass is a suite of tools to enable mass spectrometry data analysis using modern machine learning techniques.
  ☆51Updated 3 years ago
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆9Updated 5 years ago
• HuanLab / ISFrag
  A bioinformatic tool facilitating automated in-source fragmentation identification
  ☆10Updated 2 years ago
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆15Updated 8 years ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆10Updated 4 years ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆42Updated last year
• CompOmics / IM2Deep
  Collisional cross-section prediction for modified and multiconformational peptides
  ☆12Updated 2 weeks ago
• CompOmics / moFF
  A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file
  ☆33Updated 4 years ago
• computational-metabolomics / msPurity
  A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• YuanyueLi / group-dia
  Group-DIA, a software for analyzing multiple DIA data files
  ☆13Updated 8 years ago
• computational-metabolomics / msp2db
  Convert MSP files into a database
  ☆10Updated 4 years ago
• ZhuMetLab / MetDNA2
  Knowledge-guided multilayer network approach is executed in MetDNA2
  ☆16Updated 2 years ago
• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆24Updated 3 months ago
• PHOENIXcenter / deeprtalign
  a deep learning-based retention time alignment tool for large cohort LC-MS data analysis
  ☆13Updated last year
• OpenMS / streamlit-template
  ☆16Updated last week