edammer / TAMPORLinks
Tunable Approach for Median Polish of Ratio -- Biological Abundance Batch Effect Removal
☆31Updated 6 months ago
Alternatives and similar repositories for TAMPOR
Users that are interested in TAMPOR are comparing it to the libraries listed below
Sorting:
- An R interface to enrichR☆93Updated 10 months ago
- Tools for manipulating annotated data matrices☆91Updated 4 years ago
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated this week
- scDataviz: single cell dataviz and downstream analyses☆65Updated 4 years ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆46Updated 2 months ago
- R package containing the Cerebro application.☆40Updated 4 years ago
- Identify and correct invalid gene symbols☆60Updated last year
- collection of notebooks with different cytoscape workflows☆50Updated 2 years ago
- R package for analysing proteomics data☆50Updated 2 years ago
- Content for the OSCA Book.☆66Updated 2 years ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆42Updated 4 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆38Updated 3 years ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆93Updated 11 months ago
- Simplify functional enrichment results☆120Updated last year
- ☆27Updated 4 years ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆56Updated 2 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Quantify and interpret divers of variation in multilevel gene expression experiments☆69Updated 2 weeks ago
- An r package that works as a wrapper to homologene☆47Updated 2 years ago
- Bayesian network plot for the enrichment analysis results☆66Updated last year
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- DEP package☆28Updated 3 years ago
- ☆48Updated last year
- An r package for proteomics data Analysis, developed from DEP.☆32Updated 8 months ago
- A General Framework for Consensus Partitioning☆63Updated 10 months ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆30Updated last year
- Normalize CITEseq Data☆66Updated last month
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆63Updated last month
- Updated implementation of the GSEA-P R application for modern R distributions☆97Updated 4 years ago
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆53Updated 4 months ago