Code associated with the data analysis for Miyoshi & Morabito 2024
☆27Jul 8, 2025Updated 8 months ago
Alternatives and similar repositories for DSAD_Spatial_Miyoshi_Morabito_2024
Users that are interested in DSAD_Spatial_Miyoshi_Morabito_2024 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- ☆13Feb 12, 2026Updated last month
- SPAtial Transcriptomics resource for subCellular and High-throughput platforms☆22Dec 10, 2024Updated last year
- ☆36Oct 22, 2025Updated 5 months ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Jun 29, 2022Updated 3 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Analyzing chromatin accessibility data in R☆18Jun 23, 2023Updated 2 years ago
- SPatial INtegration of spatially resolved transcriptomics datasets☆18Mar 14, 2025Updated last year
- Code repository for single-cell atlas of Alzheimer's disease progression across brain regions☆42Apr 23, 2024Updated last year
- Reproducibility repository for the Human Neural Organoid Atlas publication☆44Dec 16, 2024Updated last year
- Create Regional Association Plots☆13Sep 7, 2025Updated 6 months ago
- Single cell Type Enrichment Analysis for Phenotypes (STEAP)☆14Jun 16, 2021Updated 4 years ago
- An accurate and efficient colocalization method accounting for multiple causal signals☆13Jun 3, 2024Updated last year
- From geospatial to spatial -omics☆101Mar 18, 2026Updated last week
- List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS☆31Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆15Feb 20, 2025Updated last year
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆18Jul 14, 2023Updated 2 years ago
- ☆31Sep 15, 2025Updated 6 months ago
- Mediated Expression Score Regression (MESC)☆28Nov 4, 2025Updated 4 months ago
- Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease☆97Jul 1, 2021Updated 4 years ago
- ☆19Mar 31, 2024Updated last year
- ☆53Oct 9, 2025Updated 5 months ago
- Codebase for the paper Zucha et al. titled "Spatiotemporal transcriptomic map of glial cell response in mouse model of acute brain ischem…☆13Oct 23, 2024Updated last year
- ☆13Feb 2, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using h…☆112Jun 9, 2025Updated 9 months ago
- BWMR (Bayesian Weighted Mendelian Randomization)☆21Jun 14, 2023Updated 2 years ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆16Mar 17, 2026Updated last week
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆19Mar 30, 2021Updated 5 years ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆22Jul 6, 2023Updated 2 years ago
- ☆14Aug 9, 2017Updated 8 years ago
- Toolbox of the Human Neural Organoid Cell Atlas☆30Updated this week
- Tool for predicting TWAS features (e.g. gene expression) in a target sample☆16Jun 24, 2025Updated 9 months ago
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆12Dec 15, 2025Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Computational pipeline to process EasySci-RNA data.☆23Jan 17, 2024Updated 2 years ago
- Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)☆30May 16, 2025Updated 10 months ago
- ☆16May 13, 2022Updated 3 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆40Nov 14, 2022Updated 3 years ago
- Data processing and analysis scripts for our spatial profiling of embryos using seqFISH☆16Feb 10, 2023Updated 3 years ago
- ☆26Apr 1, 2025Updated 11 months ago
- agent based modelling☆35Aug 28, 2024Updated last year