Alternatives and similar repositories for ldscr

Users that are interested in ldscr are comparing it to the libraries listed below

• RayDebashree / PLACO
  A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics
  ☆39Updated 4 months ago
• jrs95 / hyprcoloc
  Hypothesis Prioritisation in multi-trait Colocalization
  ☆55Updated last year
• n-mounier / MRlap
  R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples
  ☆67Updated last year
• dingruofan / xQTLbiolinks
  xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
  ☆39Updated last year
• ACDBio / AutoMR
  An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…
  ☆33Updated 3 years ago
• jean997 / cause
  R package for CAUSE
  ☆56Updated 2 years ago
• mglev1n / mrbma
  Mendelian Randomization Bayesian Model Averaging
  ☆22Updated 2 years ago
• jwr-git / pwcoco
  Pair-wise conditional analysis and colocalisation
  ☆42Updated last year
• cnfoley / hyprcoloc
  R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data
  ☆59Updated 5 years ago
• josefin-werme / LAVA
  ☆80Updated 3 months ago
• jingshuw / GRAPPLE
  An R package for Mendelian Randomization
  ☆39Updated last year
• rhhao / csMR
  Perform cell-stratified MR analysis through integrating GWAS and QTL data
  ☆35Updated 2 weeks ago
• gagelo01 / GagnonMR
  ☆54Updated last year
• alhenry / cvd1-hf
  Analysis code for Olink CVD1 - HF analysis
  ☆15Updated last year
• studentyaoshi / MR
  ☆23Updated 2 years ago
• MRCIEU / MRInstruments
  Data objects for various sets of instruments
  ☆47Updated 5 years ago
• as2970 / EA_brain_AD_MR
  ☆41Updated 4 years ago
• precimed / gsa-mixer
  ☆20Updated 5 months ago
• WSpiller / MVMR
  MVMR R Package
  ☆53Updated 3 weeks ago
• adriaan-vd-graaf / mrlink2
  MR-link-2: pleiotropy robust cis MR
  ☆21Updated 6 months ago
• gamazonlab / MR-JTI
  ☆57Updated last year
• kn3in / mRnd
  Power calculations for Mendelian Randomisation
  ☆24Updated 8 years ago
• eleanorsanderson / MediationMR
  ☆26Updated 5 years ago
• explodecomputer / plinkbinr
  R package that contains plink binaries for windows, mac and linux
  ☆14Updated 6 years ago
• Kukuster / SumStatsRehab
  GWAS summary statistics files QC tool
  ☆42Updated last year
• JonSulc / PolyMR
  Polynomial Mendelian randomization for the inference of non-linear causal effects
  ☆14Updated 2 years ago
• qlu-lab / SUPERGNOVA
  ☆30Updated 4 years ago
• daiqile96 / OTTERS
  A powerful TWAS framework leveraging summary-level reference data
  ☆32Updated 10 months ago
• ZixuanWu1 / FLOW-MR
  An R package for Mendelian Randomization in Mediation setting
  ☆17Updated 10 months ago
• LizaDarrous / lhcMR
  lhcMR
  ☆26Updated last year