Alternatives and similar repositories for ldscr

Users that are interested in ldscr are comparing it to the libraries listed below

• jrs95 / hyprcoloc
  Hypothesis Prioritisation in multi-trait Colocalization
  ☆54Updated last year
• RayDebashree / PLACO
  A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics
  ☆34Updated 2 months ago
• josefin-werme / LAVA
  ☆72Updated 2 weeks ago
• n-mounier / MRlap
  R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples
  ☆63Updated 7 months ago
• mglev1n / mrbma
  Mendelian Randomization Bayesian Model Averaging
  ☆22Updated 2 years ago
• jean997 / cause
  R package for CAUSE
  ☆56Updated last year
• jingshuw / GRAPPLE
  An R package for Mendelian Randomization
  ☆38Updated last year
• cnfoley / hyprcoloc
  R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data
  ☆55Updated 4 years ago
• dingruofan / xQTLbiolinks
  xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
  ☆37Updated 6 months ago
• jwr-git / pwcoco
  Pair-wise conditional analysis and colocalisation
  ☆40Updated last year
• kn3in / mRnd
  Power calculations for Mendelian Randomisation
  ☆22Updated 7 years ago
• ACDBio / AutoMR
  An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…
  ☆33Updated 2 years ago
• WSpiller / MVMR
  MVMR R Package
  ☆51Updated 2 weeks ago
• studentyaoshi / MR
  ☆22Updated 2 years ago
• MRCIEU / MRInstruments
  Data objects for various sets of instruments
  ☆45Updated 5 years ago
• eleanorsanderson / MediationMR
  ☆25Updated 4 years ago
• astheeggeggs / PHESANT
  PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
  ☆19Updated 3 years ago
• gagelo01 / GagnonMR
  ☆53Updated last year
• as2970 / EA_brain_AD_MR
  ☆41Updated 3 years ago
• rhhao / csMR
  Perform cell-stratified MR analysis through integrating GWAS and QTL data
  ☆32Updated last month
• MRCIEU / ieugwasr
  R interface to the IEU GWAS database API
  ☆98Updated 3 weeks ago
• gamazonlab / MR-JTI
  ☆57Updated 7 months ago
• opain / TWAS-plotter
  R script to make Manhattan-style plot for TWAS
  ☆39Updated 4 years ago
• adriaan-vd-graaf / mrlink2
  MR-link-2: pleiotropy robust cis MR
  ☆20Updated 3 weeks ago
• amymariemason / SUMnlmr
  non-linear MR for semi-summarized data
  ☆23Updated last year
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆32Updated last year
• alhenry / cvd1-hf
  Analysis code for Olink CVD1 - HF analysis
  ☆13Updated last year
• rondolab / MR-PRESSO
  Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.
  ☆90Updated 2 years ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆41Updated 7 years ago
• LizaDarrous / lhcMR
  lhcMR
  ☆26Updated last year