☆46Jun 1, 2026Updated 3 weeks ago
Alternatives and similar repositories for Swave
Users that are interested in Swave are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆13Mar 16, 2026Updated 3 months ago
- A mosaic genome painting tool for plant genomes☆18May 6, 2026Updated last month
- A list of software for pangenomics☆193May 21, 2026Updated last month
- ☆23Updated this week
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A pipeline for genomic variant detection with genome assemblies at population scale☆40Jun 3, 2025Updated last year
- Genome assembly soft-masking using Red (REpeat Detector)☆18Dec 7, 2018Updated 7 years ago
- scripts used in Rice Pangenome Projects (Evolution).☆16Oct 29, 2023Updated 2 years ago
- AccuSyn: An Accurate Web-based Genome Synteny Browser☆16Aug 27, 2024Updated last year
- Compare different genome alignment tools using a wide range of genomes with different complexities.☆14Dec 3, 2022Updated 3 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆27Apr 17, 2026Updated 2 months ago
- ☆12Apr 10, 2021Updated 5 years ago
- Hybrid somatic SV caller using long reads and short-read refinement for tumor–normal sequencing.☆16May 14, 2026Updated last month
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 8 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Add multiple thread function for genome comparison☆17Sep 29, 2021Updated 4 years ago
- CViTjs - Chromosome Viewing Tool. A javascript tool for quick whole-genome views of data.☆11Jan 15, 2021Updated 5 years ago
- AlfaPang builds pangenome graphs without alignments or references.☆16Nov 7, 2025Updated 7 months ago
- CMOD Wikidata App built on Django Framework for editing Wikidata with existing GeneWIki bot code☆12Feb 3, 2017Updated 9 years ago
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Aug 23, 2018Updated 7 years ago
- Functions to compare a SV call sets against a truth set.☆32Jun 18, 2025Updated last year
- B73Ab10 genome assembly methods☆16Jan 21, 2022Updated 4 years ago
- ☆20Nov 30, 2023Updated 2 years ago
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27May 24, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- NovoGraph: building whole genome graphs from long-read-based de novo assemblies☆46Feb 23, 2021Updated 5 years ago
- Nextflow implementation of the smoove workflow and other tools for SV calling and QC☆12Nov 12, 2020Updated 5 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆46Sep 13, 2024Updated last year
- Population genetics analysis on VG☆17Apr 22, 2021Updated 5 years ago
- Python library to identify Identical By State regions☆24Mar 19, 2023Updated 3 years ago
- calling SVs from Blasr contig level alignments☆54Mar 9, 2018Updated 8 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- ☆13Oct 30, 2019Updated 6 years ago
- Sketch phylogenetic trees and networks