mattarnoldbio / alphapickle
☆31Updated last year
Alternatives and similar repositories for alphapickle:
Users that are interested in alphapickle are comparing it to the libraries listed below
- ☆49Updated 3 weeks ago
- Set of Python scripts designed to be a dependency-free cross-platform swiss army knife for PDB files.☆26Updated 2 years ago
- ☆85Updated last year
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆93Updated 9 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆83Updated last year
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆98Updated 2 months ago
- ☆81Updated 7 months ago
- A domain parser for Alphafold models☆34Updated last year
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆47Updated 2 weeks ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆56Updated last week
- scripts to visualise results of alphafold2 and 3 multimer runs☆17Updated 10 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆56Updated 4 months ago
- Set of useful HADDOCK utility scripts☆51Updated 7 months ago
- ☆39Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆54Updated 3 weeks ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated last year
- Protein folding in Pymol☆108Updated 3 months ago
- Text-guided protein design☆47Updated 2 weeks ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆65Updated 8 months ago
- ☆35Updated 6 months ago
- ☆108Updated 2 years ago
- Small_molecule_binder_design_use_pseudocycles☆18Updated 5 months ago
- Official repo of the modular BioExcel version of HADDOCK☆136Updated last week
- Modelling of Large Protein Complexes☆37Updated last year
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆55Updated last year
- ☆29Updated 3 years ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆33Updated 2 years ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆42Updated 3 months ago
- Analysis of alphafold and colabfold results☆27Updated 2 weeks ago
- PyDock Tutorial☆30Updated 6 years ago