steineggerlab / colabfold-protocol
ColabFold protocol
☆44Updated last month
Related projects ⓘ
Alternatives and complementary repositories for colabfold-protocol
- ☆20Updated last year
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆30Updated last month
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆78Updated 8 months ago
- ☆46Updated 5 months ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆36Updated 2 months ago
- A domain parser for Alphafold models☆32Updated 11 months ago
- ☆21Updated 5 months ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆60Updated this week
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆62Updated 5 months ago
- Rendering protein mutation movies from predicted 3D structures☆20Updated 11 months ago
- Deep learning prediction of enzyme optimum pH☆25Updated 11 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆48Updated 4 months ago
- ☆64Updated last month
- ☆29Updated last year
- Tools for annotation, processing and ML for antibody sequences☆20Updated 2 weeks ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆22Updated last year
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis and allostery from deep mutational scan…☆40Updated last week
- Detection of remote homology by comparison of protein language model representations☆45Updated this week
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆86Updated 2 months ago
- Transmembrane proteins predicted through Language Model embeddings☆30Updated 8 months ago
- ☆29Updated 3 weeks ago
- Python framework for doing ancestral sequence reconstruction☆34Updated 4 months ago
- ☆33Updated last month
- ☆29Updated 11 months ago
- Geometric deep learning of protein–DNA binding specificity☆49Updated last month
- Template-based protein design with Raygun☆44Updated 3 weeks ago
- Evolutionary conservation estimation of residues or nucleotides☆33Updated 2 years ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆38Updated 4 months ago
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆18Updated 3 months ago
- Feature map and function annotation of Proteins☆30Updated 5 months ago