Alternatives and similar repositories for colabfold-protocol:

Users that are interested in colabfold-protocol are comparing it to the libraries listed below

• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆81Updated last year
• SNU-CSSB / RF2-Lite
  ☆25Updated 9 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 9 months ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆34Updated last year
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆42Updated 2 months ago
• CSUBioGroup / DPFunc
  ☆30Updated 3 weeks ago
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆35Updated 5 months ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated last year
• maovshao / PLMSearch
  PLMSearch enables accurate and fast homologous protein search with only sequences as input
  ☆67Updated 3 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆53Updated 3 months ago
• tymor22 / tm-vec
  ☆66Updated 5 months ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 3 months ago
• PDB-REDO / AlphaBridge
  ☆32Updated 2 weeks ago
• ml4bio / Dense-Homolog-Retrieval
  Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval
  ☆101Updated 6 months ago
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆19Updated last month
• swanss / FragFold
  ☆32Updated last month
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆23Updated last year
• jcheongs / alphafold-multimer
  ☆28Updated 3 years ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆74Updated 7 months ago
• clairemcwhite / vcmsa
  ☆29Updated last year
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated last year
• lehner-lab / MoCHI
  Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…
  ☆44Updated 3 weeks ago
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆88Updated 8 months ago
• UCLOrengoGroup / cath-alphaflow
  ☆19Updated 3 months ago
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆34Updated last year
• timkartar / DeepPBS
  Geometric deep learning of protein–DNA binding specificity
  ☆64Updated this week
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆35Updated 5 months ago
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆49Updated 3 months ago