Alternatives and similar repositories for colabfold-protocol

Users that are interested in colabfold-protocol are comparing it to the libraries listed below

• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 2 months ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆38Updated last year
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆73Updated this week
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆88Updated last year
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆22Updated 3 weeks ago
• SNU-CSSB / RF2-Lite
  ☆30Updated last year
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆38Updated 8 months ago
• maovshao / PLMSearch
  PLMSearch enables accurate and fast homologous protein search with only sequences as input
  ☆71Updated 5 months ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated last year
• tymor22 / tm-vec
  ☆68Updated 8 months ago
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆45Updated 4 months ago
• JudeWells / chainsaw
  ☆39Updated 8 months ago
• chayan7 / flashfold
  A tool for protein and protein complex structure prediction.
  ☆28Updated last week
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆53Updated 5 months ago
• maslov-group / DR-BERT
  ☆24Updated 2 years ago
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated last year
• ml4bio / Dense-Homolog-Retrieval
  Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval
  ☆106Updated 9 months ago
• lehner-lab / MoCHI
  Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…
  ☆47Updated last month
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆41Updated last month
• UCLOrengoGroup / cath-alphaflow
  ☆21Updated 2 weeks ago
• swanss / FragFold
  Fragment binding prediction with ColabFold
  ☆34Updated 2 months ago
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆66Updated this week
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆54Updated 2 months ago
• jtrinquier / SoftAlign
  ☆21Updated 2 weeks ago
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆23Updated last year
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 5 months ago
• clairemcwhite / vcmsa
  ☆30Updated last year
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆42Updated 3 years ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆40Updated last month
• idptools / sparrow
  Next generation sequence parameter library for proteins
  ☆30Updated 2 weeks ago