nf-core / proteinfold
Protein 3D structure prediction pipeline
☆79Updated this week
Alternatives and similar repositories for proteinfold
Users that are interested in proteinfold are comparing it to the libraries listed below
Sorting:
- snakemake pipeline for creating trees from sequence sets☆76Updated 2 weeks ago
- Evolutionary velocity with protein language models☆90Updated last year
- Multi-class signal peptide prediction and structure decoding model.☆84Updated 3 months ago
- ☆73Updated last year
- Multiple Protein Structure Alignment at Scale with FoldMason☆169Updated 3 weeks ago
- a pipeline to build similarity maps of protein space☆34Updated 5 months ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆125Updated 5 months ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆104Updated 8 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆84Updated last year
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆72Updated last week
- Fast protein structure searching or your money back☆102Updated last month
- MMseqs2 app to run on your workstation or servers☆78Updated 2 weeks ago
- Automatic oligonucleotide design for PCR-based gene synthesis☆44Updated 5 years ago
- UniProt Id Mapping through API☆31Updated 7 months ago
- Transmembrane proteins predicted through Language Model embeddings☆35Updated 3 months ago
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆31Updated 3 weeks ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆36Updated 8 months ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆38Updated last month
- Singularity recipe for AlphaFold☆36Updated 6 months ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆85Updated last year
- python tools for TCR:peptide-MHC modeling and analysis☆75Updated last year
- An RNA manipulation library.☆56Updated last year
- Software for predicting translation initiation rates in bacteria☆22Updated 5 months ago
- Cython bindings and Python interface to HMMER3.☆136Updated this week
- Genomic language model predicts protein co-regulation and function☆77Updated last month
- ColabFold protocol☆50Updated 6 months ago
- nucleic acid folding☆92Updated 9 months ago
- Feature map and function annotation of Proteins☆33Updated 11 months ago
- ☆60Updated 6 months ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆53Updated last year