☆33Feb 21, 2022Updated 4 years ago
Alternatives and similar repositories for alphafold-multimer
Users that are interested in alphafold-multimer are comparing it to the libraries listed below
Sorting:
- an ensemble usage of MAFFT-linsi --add on large datasets☆13May 31, 2024Updated last year
- ☆15Sep 26, 2025Updated 5 months ago
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆15Oct 21, 2021Updated 4 years ago
- ☆19Aug 5, 2024Updated last year
- An ultra-high-performance protein-protein docking for heterogeneous supercomputers☆71Dec 10, 2023Updated 2 years ago
- ☆24May 16, 2023Updated 2 years ago
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆21Feb 23, 2026Updated last week
- A tool to detect structural variant☆17Mar 27, 2023Updated 2 years ago
- A toolkit developed to predict and analyze PROTAC-mediated ternary complexes using AlphaFold3 and Boltz-1.☆40Jul 17, 2025Updated 7 months ago
- VGEA (Viral Genomes Easily Analyzed) is a pipeline for analysis of RNA virus next-generation sequencing data.☆20Sep 12, 2021Updated 4 years ago
- Step-by-step guide to install and configure AlphaFold 3 using a Conda Python 3.11 environment. No system-wide installations required. ✅ …☆41Dec 23, 2025Updated 2 months ago
- Gap2Seq is a gap filling and insertion genotyping tool.☆22Aug 12, 2024Updated last year
- Pipeline for protein-protein interaction prediction☆27Feb 22, 2022Updated 4 years ago
- ☆21Dec 11, 2024Updated last year
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆55Dec 27, 2023Updated 2 years ago
- ☆26Apr 2, 2025Updated 11 months ago
- dada2 formatted nifH database☆13May 17, 2024Updated last year
- GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison☆60Apr 24, 2024Updated last year
- A high performance tool to identify orthologs and paralogs across genomes.☆27Mar 8, 2023Updated 2 years ago
- A script to make downloading of SRA/GEO data easier☆33Oct 6, 2023Updated 2 years ago
- MIRROR OF: The European Molecular Biology Open Software Suite (from git://anonscm.debian.org/debian-med/emboss.git)☆29Feb 18, 2022Updated 4 years ago
- Versatile FASTA/FASTQ demultiplexer.☆33May 29, 2024Updated last year
- APBS & PDB2PQR - software for biomolecular electrostatics and solvation☆31Jun 11, 2022Updated 3 years ago
- python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.☆35Feb 1, 2024Updated 2 years ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆34Feb 24, 2026Updated last week
- Run AlphaFold2 (and multimer) step by step☆39Apr 23, 2022Updated 3 years ago
- .h5mu files interface for Seurat☆32Nov 28, 2023Updated 2 years ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆94Jan 24, 2026Updated last month
- This module includes functions that can be used to simulate mechanochemical phenomena.☆11Nov 16, 2021Updated 4 years ago
- ☆12Aug 15, 2025Updated 6 months ago
- ☆13May 27, 2025Updated 9 months ago
- rnalib: a python-based transcriptomics library☆11Jan 23, 2026Updated last month
- FastOMA is a scalable software package to infer orthology relationship.☆90Updated this week
- ☆40Oct 2, 2023Updated 2 years ago
- Inferring bacterial recombination rates from large-scale sequencing datasets.☆41Feb 25, 2023Updated 3 years ago
- 🧬 Efficient parallelized peta-scale protein database search☆40Jan 4, 2024Updated 2 years ago
- ☆95Oct 14, 2025Updated 4 months ago
- MetaCompass: Reference-guided Assembly of Metagenomes☆42Aug 13, 2025Updated 6 months ago
- OpenSMOG is a Python library for performing molecular dynamics simulations using Structure-Based Models. OpenSMOG uses OpenMM.☆12Feb 20, 2026Updated last week