Alternatives and similar repositories for alphafold-multimer:

Users that are interested in alphafold-multimer are comparing it to the libraries listed below

• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 9 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆81Updated 11 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆51Updated 11 months ago
• Wang-Lin-boop / GetPDB
  Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…
  ☆41Updated 7 months ago
• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆53Updated 9 months ago
• timkartar / DeepPBS
  Geometric deep learning of protein–DNA binding specificity
  ☆63Updated 2 weeks ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆101Updated 2 years ago
• AlexanderKroll / ESP
  ☆69Updated 6 months ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆34Updated last year
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆109Updated last year
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆87Updated 7 months ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆136Updated 5 months ago
• LAnAlchemist / Pseudocycle_small_molecule_binder
  Small_molecule_binder_design_use_pseudocycles
  ☆18Updated 4 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆50Updated last month
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆53Updated 3 months ago
• amirpandi / Deep_AMP
  Generator and regressor neural networks for antimicrobial peptides
  ☆21Updated last year
• AlexanderKroll / KM_prediction
  ☆34Updated 2 years ago
• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆128Updated last month
• Kuhlman-Lab / evopro
  ☆73Updated last week
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆42Updated 2 months ago
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆90Updated this week
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 3 months ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆51Updated 6 months ago
• Shunsuke-1994 / rfamgen
  Code repository of "Deep generative design of RNA family sequences"
  ☆31Updated 8 months ago
• CSUBioGroup / DPFunc
  ☆29Updated 2 weeks ago
• SNU-CSSB / RF2-Lite
  ☆25Updated 9 months ago
• ikalvet / heme_binder_diffusion
  ☆113Updated 5 months ago
• tymor22 / tm-vec
  ☆65Updated 5 months ago
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆34Updated last year
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆74Updated 7 months ago