smithijk / vcf_fdw_postgresqlLinks
A PostgreSQL foreign data wrapper for VCF files.
☆18Updated 8 years ago
Alternatives and similar repositories for vcf_fdw_postgresql
Users that are interested in vcf_fdw_postgresql are comparing it to the libraries listed below
Sorting:
- non-redundant, compressed, journalled, file-based storage for biological sequences☆46Updated last month
- Workflow Description Language compiler for the DNAnexus platform☆42Updated 2 years ago
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- Server wrapper that turns command line tools into web services☆60Updated 7 years ago
- HGVS variant description extractor☆11Updated 5 years ago
- WDL plugin for pytest☆48Updated 2 years ago
- The WES API is a standard way to run and manage portable workflows.☆85Updated 3 weeks ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Variant Caller Analysis Dashboard and Data Management System☆36Updated 9 years ago
- LEGACY repository for SODAR Core, preserved for saving review-related issues. See "sodar-core" for the up-to-date repository.☆15Updated 3 years ago
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆70Updated 3 weeks ago
- Aligner for sequencing data☆18Updated 7 years ago
- Repository for development of the genomic module of the CDM.☆23Updated 6 years ago
- A package for creating and managing sample identifiers in comparative -omics datasets.☆24Updated 8 years ago
- The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …☆106Updated 2 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 3 months ago
- ☆27Updated 2 years ago
- Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:☆17Updated last year
- GA4GH Variation Representation Python Implementation☆60Updated this week
- Elixir Beacon Reference Implementation. Latest release is compliant with v1.1.0 of the specification.☆14Updated 5 years ago
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆32Updated 3 weeks ago
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆26Updated last month
- Sparse Project VCF: evolution of VCF to encode population genotype matrices efficiently☆58Updated last year
- the GMOD database schema☆43Updated last year
- Reference server implementation for the GA4GH HTSget API standard.☆12Updated 2 years ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago
- Workflow Description Language - Specification and Implementations☆26Updated 6 years ago
- localised duplicate detection on patterned flow cells☆10Updated 6 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 7 years ago