smithijk / vcf_fdw_postgresqlLinks
A PostgreSQL foreign data wrapper for VCF files.
☆18Updated 8 years ago
Alternatives and similar repositories for vcf_fdw_postgresql
Users that are interested in vcf_fdw_postgresql are comparing it to the libraries listed below
Sorting:
- HGVS variant description extractor☆11Updated 4 years ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- WDL plugin for pytest☆48Updated last year
- A fast Python library for VCF files leveraging Cython for speed.☆52Updated 7 years ago
- WDL tools for parsing, type-checking, and more☆25Updated last month
- hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society …☆18Updated 2 years ago
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- GA4GH Variation Representation Python Implementation☆56Updated last month
- PathOS is a clinical application for filtering, analysing and reporting on NGS variants☆28Updated 4 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- Efficient handling of FASTQ files from Python☆51Updated last week
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆26Updated last month
- SQL support plugin for Nextflow☆26Updated last week
- Variant Caller Analysis Dashboard and Data Management System☆36Updated 9 years ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆41Updated last month
- provides common tools and lookup tables used primarily by the hgvs and uta packages☆22Updated 3 months ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Parse Illumina sample sheets with Python☆50Updated last year
- Variant Effect Prediction for Python☆15Updated 8 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Central repository for the VICC metakb web application☆15Updated last week
- Website to analyze conflicting assertions in ClinVar