A PostgreSQL foreign data wrapper for VCF files.
☆18May 8, 2017Updated 9 years ago
Alternatives and similar repositories for vcf_fdw_postgresql
Users that are interested in vcf_fdw_postgresql are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Mapping-free variant caller for short-read Illumina data☆21Apr 2, 2020Updated 6 years ago
- Naive PCA for genotype data☆10Jul 27, 2016Updated 10 years ago
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10May 7, 2017Updated 9 years ago
- A protocol to estimate global ancestry starting from raw Illumina data☆11Oct 16, 2019Updated 6 years ago
- extract SV signal from a BAM☆10Jul 26, 2018Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- LEGACY repository for SODAR Core, preserved for saving review-related issues. See "sodar-core" for the up-to-date repository.☆15Jun 1, 2022Updated 4 years ago
- GenomicsDB☆109Jan 3, 2023Updated 3 years ago
- haplotypes genotypes and alleles example decision synthesizer☆20Jun 13, 2019Updated 7 years ago
- Forest Management Tool a C++ library for forest planning.☆17Updated this week
- reference implementation of GA4GH WGS Quality Control Standards☆11Nov 25, 2025Updated 8 months ago
- DeeNA Zip (SAM/BAM compression tool)☆13May 25, 2019Updated 7 years ago
- Beacon v2 Reference Implementation (API)☆17Dec 13, 2024Updated last year
- Python interface to the GenoLogics LIMS server via its REST API.☆30Aug 13, 2025Updated 11 months ago
- An algorithm for clonal tree reconstruction from multi-sample cancer sequencing data☆14Apr 1, 2018Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Fast calculations of linkage-disequilibrium in large-scale human cohorts☆44Nov 9, 2019Updated 6 years ago
- Instrumental Variable Quantile Regression☆14Jul 17, 2023Updated 3 years ago
- Simple PostgreSQL extension for tables auditing☆12Sep 25, 2017Updated 8 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 7 years ago
- Gene Exploration System for Variance☆22Dec 8, 2022Updated 3 years ago
- Flexible guide to performing code review☆10Jul 17, 2017Updated 9 years ago
- Tools for munging genomic data☆21Jul 9, 2019Updated 7 years ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆18Mar 10, 2018Updated 8 years ago
- Analysis of similarity of HPO terms in groups of individuals☆24May 3, 2022Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Fastq compression☆19Oct 3, 2019Updated 6 years ago
- A library for compressing, encrypting, and querying alignment data.☆15Jul 6, 2016Updated 10 years ago
- ODK Tools☆12Nov 15, 2023Updated 2 years ago
- This is a Genome Annotation Framework developed with the goal of annotating VCF files (Exomes or Genomes) from patients with Mendelian Di…☆23May 16, 2026Updated 2 months ago
- Repository to ZIP Plink2 LD files and have random access☆17Updated this week
- Extensible specification for representing and uniquely identifying biological sequence variation☆96Updated this week
- Web application to collect and visualise data across multiple MultiQC runs.☆95Dec 13, 2024Updated last year
- Tabular data and SQL for people who don't have time to faff about☆18Jul 27, 2022Updated 4 years ago
- Modeling and Analysis of (Statistical) Genetics data in python☆20Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Examples for the Dagger Python SDK☆15Jan 18, 2023Updated 3 years ago
- Simple text based xform Generator and Editor for Open Data Kit and OpenXData☆12Oct 13, 2020Updated 5 years ago
- Python Programs for accessing CDISC Library standards.☆11Nov 9, 2019Updated 6 years ago
- The Pretty PDF Printer--Converting ODK XlsForm Excel files into "paper questionnaires".☆12Dec 8, 2022Updated 3 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆60Sep 11, 2025Updated 10 months ago
- Trying out the Dataframe Polars library with Delta Lake ... feat Python.☆12Jan 29, 2025Updated last year
- ☆15Jul 27, 2023Updated 3 years ago