An R package to call oomycete effectors
☆11Aug 31, 2023Updated 3 years ago
Alternatives and similar repositories for effectR
Users that are interested in effectR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- flexible pipelines for scalable secretome prediction, R package☆12Feb 21, 2019Updated 7 years ago
- This site provides information on conducting reproducible science using the R language.☆13Nov 2, 2016Updated 9 years ago
- Effector prediction pipeline based on protein properties.☆17Jul 18, 2025Updated last year
- Quickly transform data.frames into onehot encoded matrices☆11Apr 11, 2019Updated 7 years ago
- Proteomics Toolkit in Ruby☆12Mar 28, 2018Updated 8 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- This is a simple script to use [plip](https://github.com/pharmai/plip) to batch analysis of interactions between proteins and ligands tha…☆10Dec 23, 2020Updated 5 years ago
- A systematic/quantitative review of articles, which provides a basis for identifying what has been done so far in the field of plant path…☆23Aug 8, 2024Updated 2 years ago
- 📦 A Command Line Tool for downloading protein structures, sequences and MSAs☆10Nov 21, 2017Updated 8 years ago
- Interactive package for Short AsyNchronous Time-series Analysis (SANTA) in R, implemented in Shiny☆11Mar 6, 2024Updated 2 years ago
- A unified array job submitter for LSF, SGE/UGE and Slurm☆32Oct 15, 2024Updated 2 years ago
- 🥖 Calculate baker's percentages for sourdough bread 🥖☆19Oct 23, 2023Updated 3 years ago
- DMD Open-access Variant Explorer (DOVE): A tool to aggregate clinically relevant information related to variants in the DMD gene.☆12Feb 25, 2026Updated 8 months ago
- The RepeatScout 1.0.5, written by Pevzner et al., source code for browsing. The official release and more information are available at h…☆15Apr 14, 2023Updated 3 years ago
- An R package for the Google Kubernetes Engine API☆15May 1, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Register exponential family curves☆18Feb 16, 2026Updated 8 months ago
- ☆11Jan 12, 2015Updated 11 years ago
- ☆12Mar 26, 2020Updated 6 years ago
- Workshop bringing together individuals interested in developing curriculum, workflows, and tools to strengthen reproducibility in researc…☆33Jul 12, 2015Updated 11 years ago
- Example notebooks that illustrate how to generate knowledge-based features. Features can be used in a variety of ML models, including rec…☆12Feb 23, 2022Updated 4 years ago
- FRAMA: From RNA-seq data to annotated mRNA assemblies☆12Sep 28, 2018Updated 8 years ago
- Ligand-Receptor docking with AutoDock Vina☆12Mar 21, 2024Updated 2 years ago
- SNP genotyping in polyploids☆17Aug 12, 2020Updated 6 years ago
- Software for analyzing multiple protein-protein interaction docking solutions, calculating contact regions using mdtraj, and visualizing …☆12Jun 16, 2017Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Official Implementation of (k,c)(≤)-SetGNN (NeurIPS 2022)☆11Mar 27, 2024Updated 2 years ago
- PDBe Programming Interfaces information☆14Jul 23, 2018Updated 8 years ago
- Code for the Brassica oleracea/rapa/napus genomic comparison☆16Apr 29, 2021Updated 5 years ago
- Docking benchmark 5 - cleaned and ready to use for HADDOCK☆14Updated this week
- rOpenSci .github files☆11Jul 29, 2019Updated 7 years ago
- Cheat sheet for interacting with the SLURM scheulder☆17Jun 1, 2017Updated 9 years ago
- McDock: Simple Monte Carlo docking algorithm in C++☆11Feb 10, 2017Updated 9 years ago
- Analysing Capture Seq Count Data☆14Jun 11, 2018Updated 8 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆74Sep 10, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python package for virtual screening of generated molecules using autodock-vina and tensorflow☆14Mar 22, 2021Updated 5 years ago
- ABC of chemoinformatics☆20Aug 3, 2018Updated 8 years ago
- ☆11Feb 16, 2025Updated last year
- ☆11May 10, 2025Updated last year
- A pipeline for whole genome assembly☆18Apr 21, 2022Updated 4 years ago
- A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.☆13Aug 19, 2024Updated 2 years ago
- Ensemble learning with graph neural networks for disease module discovery and classification☆12Nov 5, 2023Updated 2 years ago