Devel repository for minfi
☆64Apr 30, 2024Updated 2 years ago
Alternatives and similar repositories for minfi
Users that are interested in minfi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆36Oct 2, 2014Updated 11 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆29Dec 5, 2023Updated 2 years ago
- A cross-package Bioconductor workflow for analysing methylation array data☆11Mar 31, 2017Updated 9 years ago
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10May 17, 2017Updated 9 years ago
- ☆22Dec 17, 2020Updated 5 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Course material for CSAMA 2015: Statistics and Computing in Genome Data Science☆11Mar 15, 2023Updated 3 years ago
- A 450k tutorial in the form of an R package☆12Jul 5, 2016Updated 9 years ago
- 🍪 SEnsible Step-wise Analysis of DNA MEthylation BeadChips☆81Feb 6, 2026Updated 3 months ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆12Apr 20, 2023Updated 3 years ago
- Website and blog for the research group of Mark J. van der Laan☆11Jul 1, 2021Updated 4 years ago
- Epigenetic Smoking status Estimator☆10Nov 24, 2020Updated 5 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Nov 26, 2025Updated 5 months ago
- See https://github.com/LTLA/SingleRBook for the latest version of this content.☆13Jun 21, 2022Updated 3 years ago
- An R package to interpret biological trends from DNA methylation data☆18May 24, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R package for differential discovery analyses in high-dimensional cytometry data☆25Feb 8, 2025Updated last year
- ☆13Sep 18, 2017Updated 8 years ago
- Impute DNA methylation from WGBS data.☆11Apr 23, 2019Updated 7 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Feb 23, 2026Updated 2 months ago
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆15May 8, 2026Updated last week
- NGSTools☆16Mar 3, 2017Updated 9 years ago
- Log all process output to a file, for R☆10Apr 6, 2018Updated 8 years ago
- ☆10Sep 11, 2020Updated 5 years ago
- distinct: a method for differential analyses via hierarchical permutation tests☆13Dec 4, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Workshop (2-6 hours): cleaning, missing value imputation, EDA, ensemble learning, calibration, variable importance ranking, accumulated l…☆14Jun 20, 2020Updated 5 years ago
- BISulfite-seq CUI Toolkit☆26May 11, 2026Updated last week
- A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)☆27Jul 28, 2025Updated 9 months ago
- Supplementary Code for "Mapping DNA methylation across development, genotype, and schizophrenia in the human frontal cortex"☆13Oct 27, 2015Updated 10 years ago
- Open-source ImageJ plugin to quantify cardiomyocyte and cardiac muscle contraction in vitro and in vivo☆15Apr 16, 2021Updated 5 years ago
- A normalization and copy number variation calling procedure for whole exome DNA sequencing data.☆11Sep 29, 2019Updated 6 years ago
- Benchmark pipeline for Structural Variation analyses, funded by the ALLBio.☆24Aug 1, 2014Updated 11 years ago
- ☆18Oct 22, 2024Updated last year
- An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…☆14Mar 4, 2022Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Bioconductor package for analysis of methylation data from Illumina's Infinium HumanMethylation arrays.☆15Mar 3, 2025Updated last year
- BISulfite-seq CUI Toolkit☆69Oct 9, 2025Updated 7 months ago
- Sparse Signaling Pathway Sampling: MCMC for signaling pathway inference☆14Oct 24, 2022Updated 3 years ago
- R package for DNA methylation analysis☆253Jan 18, 2026Updated 4 months ago
- Transcript assembly and quantification for RNA-Seq☆12Jun 3, 2019Updated 6 years ago
- ☆14Mar 13, 2018Updated 8 years ago
- All data and notebook for my 2020 scRNA-seq analysis workshop☆18Jul 27, 2020Updated 5 years ago