sinhakrishnendu / babappaLinks
BAsh-Based Automated Parallel Positive selection Analysis
☆15Updated 2 months ago
Alternatives and similar repositories for babappa
Users that are interested in babappa are comparing it to the libraries listed below
Sorting:
- A tool for plotting CAFE5 gene family expansion/contraction result☆31Updated last year
- ☆40Updated 2 years ago
- A parallel wrapper for LTR_FINDER☆52Updated 3 months ago
- a Semi-automated pipeline for assembling T2T genome☆19Updated 2 months ago
- A novel genome assembly pipeline based on deep learning☆62Updated 7 months ago
- An efficient assembly tool for plant mitochondrial genome☆62Updated last year
- This is the standalone version of the EviAnn pipeline☆100Updated this week
- ☆30Updated 3 months ago
- use long sequenced reads to close gaps in assemblies☆37Updated 6 years ago
- Centromics: visualing centromeres with multiple omics data☆19Updated last year
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆63Updated 6 months ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆67Updated 4 years ago
- ☆74Updated this week
- To phase, partition and visualize subgenomes of a neoallopolyploid or hybrid based on the subgenome-specific repetitive kmers.☆62Updated 3 months ago
- Genome annotation pipeline☆59Updated last year
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆33Updated 9 months ago
- DNA序列比对结果 可视化展示工具☆52Updated 2 years ago
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆30Updated 6 months ago
- RepeatIdentifier☆66Updated 3 months ago
- A snakemake workflow for de novo genome assembly. It produces chromosome-scale primary/phased assemblies complete with organelles (mitoch…☆28Updated 2 months ago
- Neural network classification of TE☆90Updated last month
- BITACORA: A Bioinformatics tool for gene family annotation☆46Updated last month
- HiCAT new project☆28Updated last month
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆49Updated last year
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆62Updated 5 years ago
- ☆34Updated 10 months ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆36Updated 5 months ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆24Updated last year
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆81Updated 4 years ago
- scripts☆17Updated 6 years ago