A flexible and extensible API for annotated 2D matrix data stored in multiple underlying formats.
☆85Jul 24, 2026Updated 3 months ago
Alternatives and similar repositories for SOMA
Users that are interested in SOMA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python and R SOMA APIs using TileDB’s cloud-native format. Ideal for single-cell data at any scale.☆134Sep 8, 2026Updated last month
- CZ CELLxGENE Discover Census☆129Aug 4, 2026Updated 2 months ago
- Hosted version of cellxgene☆21Updated this week
- Shadow objects for AnnData and MuData (experimental)☆11Feb 28, 2025Updated last year
- Python interface to TileDB Cloud REST API☆15May 5, 2026Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An R package for working with LaminDB instances.☆11Oct 21, 2026Updated last week
- ☆17Sep 8, 2024Updated 2 years ago
- SOMA PyTorch loaders☆14Sep 24, 2025Updated last year
- data and model repository for single-cell data☆135Dec 21, 2023Updated 2 years ago
- The data portal supporting the submission, exploration, and management of projects and datasets to cellxgene.☆92Updated this week
- Code and documentation for the curation of cellxgene datasets☆59Oct 18, 2026Updated last week
- Build contrasts for models defined with formulaic☆13Oct 19, 2026Updated last week
- Rust Bindings for TileDB [early wip]☆20Mar 18, 2026Updated 7 months ago
- Distributed single-cell data analysis.☆40Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Access public biological ontologies.☆14Aug 7, 2024Updated 2 years ago
- Python package to perform normalization and variance-stabilization of single-cell data☆29Jul 17, 2025Updated last year
- Cookiecutter template for scverse☆91Updated this week
- Annotated multivariate observation data in R☆54Apr 1, 2026Updated 6 months ago
- Efficient variant-call data storage and retrieval library using the TileDB storage library.☆109Oct 19, 2026Updated last week
- Python API and Jupyter widget for Vitessce☆67Sep 22, 2026Updated last month
- Spatial Single Cell Analysis in Python☆612Updated this week
- ☆17Sep 27, 2026Updated last month
- Convert between AnnData and SingleCellExperiment☆154Oct 19, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Genomic Features in Python from BioConductor's AnnotationHub☆22Updated this week
- Enhancing Gene Set Overrepresentation Analysis with Large Language Models☆11Mar 17, 2025Updated last year
- Annotated data.☆783Updated this week
- A performant scientific image visualization system.☆36Aug 5, 2026Updated 2 months ago
- C# API for TileDB Embedded☆20Jul 28, 2026Updated 3 months ago
- A multi-task neural network for predicting perturbation responses to Alternative Polyadenylation usage levels☆11May 18, 2023Updated 3 years ago
- Batch balanced KNN☆180Oct 11, 2023Updated 3 years ago
- Spark interface to the TileDB storage manager [please see README]☆17Dec 23, 2024Updated last year
- An interactive explorer for single-cell transcriptomics data☆788Sep 29, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- TileDB integrations for machine learning data and model i/o (PyTorch, TensorFlow, Scikit-Learn)☆26Dec 4, 2025Updated 10 months ago
- ☆51Oct 22, 2026Updated last week
- Deep probabilistic analysis of single-cell and spatial omics data☆1,720Updated this week
- Flow & mass cytometry analytics.☆61Oct 19, 2026Updated last week
- Python interface to the TileDB storage engine☆201Oct 15, 2026Updated 2 weeks ago
- ☆14Nov 6, 2025Updated 11 months ago
- ☆24Jun 15, 2026Updated 4 months ago