sinc-lab / anc2vecLinks
Method for constructing embeddings of GO terms.
☆14Updated 4 years ago
Alternatives and similar repositories for anc2vec
Users that are interested in anc2vec are comparing it to the libraries listed below
Sorting:
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated 2 years ago
- Geometry-aware protein binding site predictor☆25Updated last year
- ☆36Updated last year
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆41Updated 5 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Updated 2 years ago
- Alignment-free structure prediction using protein language models☆22Updated 3 years ago
- Unsupervised neural network for learning embeddings of GO terms.☆20Updated 3 years ago
- ☆76Updated last year
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- An improved method for predicting toxicity of the peptides and designing of non-toxic peptides☆25Updated 8 months ago
- p-IgGen: A Generative Paired Antibody Language Model☆13Updated 9 months ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆28Updated 3 years ago
- NetSurfP 3.0: Protein secondary structure and relative solvent accessibility prediction☆24Updated 2 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆26Updated last year
- Long disorder consensus predictor☆18Updated 5 months ago
- Graph Network for protein-protein interface including language model features☆34Updated last year
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆34Updated 5 months ago
- Generates consistent PSSM and/or PDB files for protein-protein complexes☆20Updated 3 years ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- Machine learning-driven antibody design☆63Updated 2 years ago
- Machine learning prediction of enzyme optimum pH☆50Updated 9 months ago
- Python generic modular semi-automated platform containing functions for the classification of proteins based on their physicochemical pro…☆35Updated 2 years ago
- Feature map and function annotation of Proteins☆34Updated last year
- An antibody-specific language model focusing on NGL prediction☆25Updated 11 months ago
- Protein language model trained on coding DNA☆53Updated last year
- DeepGO with Fuzzy DL☆31Updated 3 years ago
- ☆46Updated 10 months ago
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- The code used to generate the results from Parkinson / Hard et al. 2022☆17Updated 7 months ago
- Deep Learning tool trained on protein sequence embeddings from protein language models to accurately detect remote homologues for CATH su…☆15Updated 3 years ago