Method for constructing embeddings of GO terms.
☆14Nov 25, 2021Updated 4 years ago
Alternatives and similar repositories for anc2vec
Users that are interested in anc2vec are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆35Jul 28, 2021Updated 4 years ago
- DeepGO with Fuzzy DL☆34Sep 19, 2022Updated 3 years ago
- Deep learning based alignment-free method for protein family modeling and prediction☆16Jul 31, 2018Updated 7 years ago
- Contrastive learning of protein representations with graph neural networks for structural and functional annotations☆11Apr 23, 2023Updated 3 years ago
- ☆18Aug 28, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Formation continue sur la FAIRisation du code informatique☆10Jun 15, 2022Updated 4 years ago
- Feature map and function annotation of Proteins☆35Jun 13, 2024Updated 2 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆36Nov 18, 2023Updated 2 years ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆13Dec 20, 2022Updated 3 years ago
- Seamless Voice Interactions with LLMs☆12Oct 28, 2023Updated 2 years ago
- Functions to extract and interact with data from the Scottish Health and Social Care Open Data platform.☆12Updated this week
- A set a basic Python scripts to edit a multiple sequence alignment and generate a protein consensus sequence☆19Jun 9, 2022Updated 4 years ago
- Unsupervised neural network for learning embeddings of GO terms.☆21Feb 19, 2022Updated 4 years ago
- Hückel model + JAX☆14Oct 13, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Clustering tool for biomolecular structural ensembles and data in general.☆10Aug 24, 2020Updated 5 years ago
- ICLR 2023: Learning to Extrapolate: A Transductive Approach☆11Aug 15, 2023Updated 2 years ago
- Markov State Models on the Muller potential: a MSMBuilder Tutorial☆12Mar 18, 2013Updated 13 years ago
- ☆11Mar 13, 2022Updated 4 years ago
- Helper function for Markov State Models☆11Jun 25, 2024Updated 2 years ago
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆21Oct 15, 2024Updated last year
- 标签传播算法（社区重叠算法）☆13Apr 28, 2018Updated 8 years ago
- InterLabelGO+: Unraveling label correlations in protein function prediction☆16Aug 5, 2025Updated 11 months ago
- Reasoner for the description logic EL+.☆17Jun 30, 2026Updated 3 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- a human-readable data format☆17Jun 28, 2025Updated last year
- Equivariant layers for RC-complement symmetry in DNA sequence data☆13Feb 24, 2022Updated 4 years ago
- [ICLR 2022] OntoProtein: Protein Pretraining With Gene Ontology Embedding☆152Mar 10, 2025Updated last year
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆41Aug 29, 2025Updated 10 months ago
- ☆17Jul 8, 2024Updated 2 years ago
- Sample and predict coarse grain 3D RNA structures☆10Feb 12, 2024Updated 2 years ago
- Web cards/apps describing peptides☆31Apr 26, 2023Updated 3 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- CArbohydrate-Protein Site IdentiFier☆16Aug 22, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- many powerful tools for studying irreducible representations of SU(n), including making animations of hadron flavor-state multiplets☆13Jun 17, 2026Updated last month
- (Python3, PyQt5) GUI software to tile large images. Designed to image 96-well plates used in wet labs.☆12Jun 28, 2018Updated 8 years ago
- Data visualizations for biomolecular dynamics☆17Oct 30, 2018Updated 7 years ago
- JAX interpreter for Vulkan☆17Jun 1, 2021Updated 5 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆29Aug 16, 2023Updated 2 years ago
- ☆13Mar 15, 2022Updated 4 years ago
- Representation learning for ontologies and their annotations☆21Apr 29, 2020Updated 6 years ago