Create cell sentences from sequencing data
☆23Aug 12, 2024Updated last year
Alternatives and similar repositories for cell2sentence
Users that are interested in cell2sentence are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- ChatCell: Facilitating Single-Cell Analysis with Natural Language☆52Jun 5, 2025Updated 10 months ago
- ☆29Sep 4, 2023Updated 2 years ago
- omics data analysis using clusterProfiler ;)☆15Jun 6, 2024Updated last year
- A Python wrapper for the bioRxiv API.☆11Aug 18, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆43Sep 23, 2025Updated 6 months ago
- ☆13Apr 1, 2026Updated 2 weeks ago
- ☆19May 25, 2024Updated last year
- http://tinyurl.com/cruk-shiny☆10Sep 13, 2017Updated 8 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- Genomic sequence preprocessing toolkit☆13Jan 13, 2026Updated 3 months ago
- A pipeline that accurately simulates high quality publicly cancer genomes (VCFs, CNAs and SVs).☆35Mar 28, 2026Updated 3 weeks ago
- ☆27Jul 2, 2024Updated last year
- A framework to score and analyze variant effects genome-wide using ChromBPNet models☆16Mar 2, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆32Jul 13, 2023Updated 2 years ago
- Learning domain-agnostic visual representation for computational pathology using medically-irrelevant style transfer augmentation☆27Feb 3, 2021Updated 5 years ago
- ☆45Jan 11, 2024Updated 2 years ago
- Code for pmVAE model, seen in ICML CompBio '21☆12Apr 12, 2024Updated 2 years ago
- Auto-annotations from Mouse brain development☆12Jul 11, 2020Updated 5 years ago
- The full training script for Enformer - Tensorflow Sonnet☆18Apr 18, 2022Updated 4 years ago
- Nextflow pipeline to re-process all public single-cell RNA-seq data☆33Jul 9, 2025Updated 9 months ago
- Allen Brain Atlas utilities, parsers and data structures☆11Jun 25, 2017Updated 8 years ago
- A fast, precise, pure Python implementation of Fisher's exact test☆12Mar 27, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- pytorch implementation for "Variational Autoencoder with Implicit Optimal Priors".☆11Oct 12, 2020Updated 5 years ago
- Deep Large-Scale Inference UsingKnockoffs☆10Nov 4, 2021Updated 4 years ago
- Model Context Protocol (MCP)☆17Mar 25, 2025Updated last year
- generalized principal component analysis (GLM-PCA) implemented in python☆63Feb 1, 2021Updated 5 years ago
- ☆14Feb 21, 2023Updated 3 years ago
- Paper collection for single cell foundation models☆36Mar 17, 2024Updated 2 years ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Jul 12, 2023Updated 2 years ago
- Even Sparser Graph Transformers☆12Dec 4, 2024Updated last year
- [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"☆30Jul 2, 2025Updated 9 months ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆40Jan 30, 2024Updated 2 years ago
- The Agentic BioML Challenge + AutoBioML framework☆18Jun 3, 2025Updated 10 months ago
- Gene2Vec: Distributed Representation of Genes Based on Co-Expression☆135Mar 18, 2022Updated 4 years ago
- BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow☆43Aug 21, 2024Updated last year
- A metric learning method to learn a provably robust Mahalanobis distance☆10Jan 29, 2022Updated 4 years ago
- Network annotation visualization☆18May 21, 2025Updated 10 months ago
- scMODAL: A general deep learning framework for single-cell Multi-Omics Data Alignment with feature Links☆22Jun 10, 2025Updated 10 months ago